* installing *source* package ‘MetaSKAT’ ...
** package ‘MetaSKAT’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Interface_Meta.cpp -o Interface_Meta.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c MatFile.cpp -o MatFile.o
In file included from MatFile.cpp:6:
./MatFile.h:52:7: warning: private field 'm_decode_out' is not used [-Wunused-private-field]
        char    m_decode_out[4];
                ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Meta.cpp -o Meta.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Permutation.cpp -o Permutation.o
In file included from Permutation.cpp:2:
./Permutation.h:37:14: warning: private field 'm_nPop' is not used [-Wunused-private-field]
    int      m_nPop;
             ^
./Permutation.h:44:13: warning: private field 'm_pScoreOrg' is not used [-Wunused-private-field]
    float * m_pScoreOrg;
            ^
./Permutation.h:46:20: warning: private field 'm_pbuffer' is not used [-Wunused-private-field]
    unsigned char       *m_pbuffer;     
                         ^
3 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RFunc.cpp -o RFunc.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Read_BED.cpp -o Read_BED.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Read_Dosage.cpp -o Read_Dosage.o
In file included from Read_Dosage.cpp:4:
./Read_Dosage.h:55:7: warning: private field 'm_FileSize' is not used [-Wunused-private-field]
        int             m_FileSize;
                        ^
./Read_Dosage.h:60:6: warning: private field 'm_debugPos' is not used [-Wunused-private-field]
        int m_debugPos ;
            ^
./Read_Dosage.h:61:6: warning: private field 'm_debuglength' is not used [-Wunused-private-field]
        int m_debuglength ;
            ^
3 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c crc32.cpp -o crc32.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o MetaSKAT.so Interface_Meta.o MatFile.o Meta.o Permutation.o RFunc.o Read_BED.o Read_Dosage.o crc32.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/MetaSKAT.Rcheck/00LOCK-MetaSKAT/00new/MetaSKAT/libs
** generating debug symbols (dSYM)
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MetaSKAT)