* using log directory ‘/Volumes/Builds/packages/big-sur-arm64/results/4.3/sf.Rcheck’ * using R version 4.3.1 (2023-06-16) * using platform: aarch64-apple-darwin20 (64-bit) * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Ventura 13.4 * using session charset: UTF-8 * checking for file ‘sf/DESCRIPTION’ ... OK * this is package ‘sf’ version ‘1.0-16’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘sf’ can be installed ... [85s/90s] OK See 'https://www.r-project.org/nosvn/R.check/r-oldrel-macos-arm64/sf-00install.html' for details. * used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ * used SDK: ‘MacOSX11.3.sdk’ * checking installed package size ... NOTE installed size is 261.4Mb sub-directories of 1Mb or more: doc 1.7Mb libs 255.1Mb sqlite 1.5Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking startup messages can be suppressed ... [0s/0s] OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [8s/9s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [8s/9s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [43s/47s] OK Running ‘aggregate.R’ [1s/1s] Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4 < Linking to GEOS 3.11.0, GDAL 3.5.3, PROJ 9.1.0; sf_use_s2() is TRUE --- > Linking to GEOS 3.12.1, GDAL 3.8.4, PROJ 9.3.1; sf_use_s2() is TRUE Running ‘cast.R’ [1s/1s] Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK Running ‘crs.R’ [1s/1s] Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK Running ‘dist.R’ [1s/1s] Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK Running ‘dplyr.R’ [2s/2s] Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK Running ‘empty.R’ [0s/0s] Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK Running ‘gdal_geom.R’ [1s/1s] Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK Running ‘geos.R’ [10s/11s] Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK Running ‘graticule.R’ [1s/2s] Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK Running ‘grid.R’ [1s/1s] Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK Running ‘maps.R’ [1s/1s] Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK Running ‘plot.R’ [5s/5s] Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK Running ‘read.R’ [1s/1s] Comparing ‘read.Rout’ to ‘read.Rout.save’ ...274a275,279 > Warning messages: > 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones > 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones Running ‘roundtrip.R’ [1s/1s] Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ... OK Running ‘s2.R’ [1s/1s] Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK Running ‘sample.R’ [0s/1s] Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK Running ‘sfc.R’ [4s/5s] Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335 < "3.11.0" "3.5.3" "9.1.0" --- > "3.12.1" "3.8.4" "9.3.1" Running ‘sfg.R’ [0s/0s] Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK Running ‘spatstat.R’ [2s/2s] Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ... OK Running ‘stars.R’ [2s/2s] Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 118c118 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) Running ‘testthat.R’ [7s/8s] Running ‘units.R’ [1s/1s] Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK Running ‘wkb.R’ [0s/1s] Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... [1s/1s] NONE ‘sf1.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf2.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf3.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf4.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf5.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf6.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘sf7.Rmd’ using ‘UTF-8’... [0s/0s] OK * checking re-building of vignette outputs ... [29s/31s] OK * checking PDF version of manual ... [6s/7s] OK * DONE Status: 1 NOTE * using check arguments '--no-clean-on-error ' * elapsed time (check, wall clock): 3:44