* installing *source* package ‘ezglm’ ... ** package ‘ezglm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’ using SDK: ‘MacOSX11.3.sdk’ /opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c ezglm.f90 -o ezglm.o ezglm.f90:971:2: 971 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1005:2: 1005 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1042:2: 1042 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1082:2: 1082 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1125:2: 1125 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1170:2: 1170 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1215:2: 1215 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1249:2: 1249 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1286:2: 1286 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1326:2: 1326 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1369:2: 1369 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1414:2: 1414 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1459:2: 1459 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1493:2: 1493 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1530:2: 1530 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1570:2: 1570 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1613:2: 1613 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1658:2: 1658 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1700:2: 1700 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1724:2: 1724 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1748:2: 1748 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1772:2: 1772 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1796:2: 1796 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1820:2: 1820 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1844:2: 1844 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1868:2: 1868 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1892:2: 1892 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1916:2: 1916 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1940:2: 1940 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1964:2: 1964 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:1988:2: 1988 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2012:2: 2012 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2036:2: 2036 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2060:2: 2060 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2084:2: 2084 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2108:2: 2108 | status = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2199:3: 2199 | 800 call err_handle(err, 1000, & | 1 Warning: Label 800 at (1) defined but not used [-Wunused-label] ezglm.f90:2213:2: 2213 | integer(kind=our_int) :: ncase | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2214:2: 2214 | integer(kind=our_int) :: npred | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2218:2: 2218 | real(kind=our_dble) :: se_beta(npred) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2223:2: 2223 | real(kind=our_dble) :: n(ncase) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2236:2: 2236 | se_beta(i) = sqrt(cov_beta(i,i))*sqrt(scale) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2237:2: 2237 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2249:2: 2249 | integer(kind=our_int) :: ncase | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2250:2: 2250 | integer(kind=our_int) :: npred | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2254:2: 2254 | real(kind=our_dble) :: se_beta(npred) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2261:2: 2261 | real(kind=our_dble) :: n(ncase) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2267:2: 2267 | real(kind=our_dble) :: fmax | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2268:2: 2268 | real(kind=our_dble) :: fmin | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2270:2: 2270 | logical :: converged | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2290:2: 2290 | pi(k) = 1.0 ! to prevent overflow | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2291:2: 2291 | elseif(log_odds(k) < fmin) then | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2292:2: 2292 | pi(k) = 0.0 ! to prevent overflow | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2307:2: 2307 | se_beta(i) = sqrt(cov_beta(i,i)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2308:2: 2308 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2310:2: 2310 | call intpr("Did not converge by iterations", -1, iter,1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2311:2: 2311 | endif | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2346:2: 2346 | allocate(dmat(no,4), beta(1:4), se_beta(1:4), pvalue(1:4), stat=status) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2347:2: 2347 | dmat=0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2348:2: 2348 | dmat(:,1) = 1.0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2349:2: 2349 | dmat(:,2) = x1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2350:2: 2350 | dmat(:,3) = x2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2354:6: 2354 | z = beta(i)/se_beta(i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2355:2: 2355 | p = 2.0 * alnorm ( abs(z), .true. ) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2356:2: 2356 | if( ((1.0+p) /= p) .and. (p <= thr)) then | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2357:2: 2357 | pvalue(i) = p | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2358:2: 2358 | else | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2359:2: 2359 | pvalue(i) = 1.0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2360:2: 2360 | endif | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2361:2: 2361 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2362:2: 2362 | res(:,1) = beta | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2363:2: 2363 | res(:,2) = se_beta | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2364:2: 2364 | res(:,3) = pvalue | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2395:2: 2395 | allocate(dmat(no,4), beta(1:4), se_beta(1:4), pvalue(1:4), stat=status) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2396:2: 2396 | dmat=0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2397:2: 2397 | dmat(:,1) = 1.0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2398:2: 2398 | dmat(:,2) = x1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2399:2: 2399 | dmat(:,3) = x2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2403:6: 2403 | z = beta(i)/se_beta(i) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2404:2: 2404 | p = 2.0 * alnorm ( abs(z), .true. ) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2405:2: 2405 | if( ((1.0+p) /= p) .and. (p <= thr)) then | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2406:2: 2406 | pvalue(i) = p | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2407:2: 2407 | else | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2408:2: 2408 | pvalue(i) = 1.0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2409:2: 2409 | endif | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2411:2: 2411 | res(:,1) = beta | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2412:2: 2412 | res(:,2) = se_beta | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2413:2: 2413 | res(:,3) = pvalue | 1 Warning: Nonconforming tab character at (1) [-Wtabs] ezglm.f90:2265:36: 2265 | integer(kind=our_int) :: ijunk, status, j, i, iter, k | 1 Warning: Unused variable ‘ijunk’ declared at (1) [-Wunused-variable] ezglm.f90:2265:47: 2265 | integer(kind=our_int) :: ijunk, status, j, i, iter, k | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] ezglm.f90:2258:35: 2258 | type(error_type) :: err, warn | 1 Warning: Unused variable ‘warn’ declared at (1) [-Wunused-variable] ezglm.f90:2225:36: 2225 | integer(kind=our_int) :: ijunk, status, j, i, iter | 1 Warning: Unused variable ‘ijunk’ declared at (1) [-Wunused-variable] ezglm.f90:2225:56: 2225 | integer(kind=our_int) :: ijunk, status, j, i, iter | 1 Warning: Unused variable ‘iter’ declared at (1) [-Wunused-variable] ezglm.f90:2225:47: 2225 | integer(kind=our_int) :: ijunk, status, j, i, iter | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] ezglm.f90:2344:15: 2344 | LOGICAL :: flag | 1 Warning: Unused variable ‘flag’ declared at (1) [-Wunused-variable] ezglm.f90:2393:15: 2393 | LOGICAL :: flag | 1 Warning: Unused variable ‘flag’ declared at (1) [-Wunused-variable] ezglm.f90:2232:11: 2232 | z = y | ^ Warning: ‘z.offset’ may be used uninitialized [-Wmaybe-uninitialized] ezglm.f90:2224:52: 2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:) | ^ note: ‘z’ declared here ezglm.f90:2232:11: 2232 | z = y | ^ Warning: ‘z.dim[0].lbound’ may be used uninitialized [-Wmaybe-uninitialized] ezglm.f90:2224:52: 2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:) | ^ note: ‘z’ declared here ezglm.f90:2232:11: 2232 | z = y | ^ Warning: ‘z.dim[0].ubound’ may be used uninitialized [-Wmaybe-uninitialized] ezglm.f90:2224:52: 2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:) | ^ note: ‘z’ declared here clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ezglm.so ezglm.o -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: could not create compact unwind for ___error_handler_MOD_insert_msg_line: registers 21 and 22 not saved contiguously in frame ld: warning: could not create compact unwind for ___error_handler_MOD___deallocate_error_handler_Msg_line_type: register 20 saved somewhere other than in frame ld: warning: could not create compact unwind for ___error_handler_MOD_err_get_msgs: registers 25 and 26 not saved contiguously in frame ld: warning: could not create compact unwind for ___error_handler_MOD_err_handle: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___matrix_methods_MOD_premult_lower_by_transpose: registers 21 and 22 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str6_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str5_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str4_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str3_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str2_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_str1_alloc: registers 23 and 24 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl6_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl5_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl4_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl3_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl2_alloc: registers 25 and 26 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_dbl1_alloc: register 24 saved somewhere other than in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int6_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int5_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int4_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int3_alloc: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int2_alloc: registers 25 and 26 not saved contiguously in frame ld: warning: could not create compact unwind for ___dynamic_allocation_MOD_int1_alloc: register 24 saved somewhere other than in frame ld: warning: could not create compact unwind for ___weighted_least_squares_MOD_fit_wls: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for _alnorm_: register 73 saved somewhere other than in frame ld: warning: could not create compact unwind for _flogit_: registers 74 and 75 not saved contiguously in frame ld: warning: could not create compact unwind for _fls_: registers 27 and 28 not saved contiguously in frame ld: warning: could not create compact unwind for _lsr_: register 73 saved somewhere other than in frame ld: warning: could not create compact unwind for _logr_: register 73 saved somewhere other than in frame installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/ezglm.Rcheck/00LOCK-ezglm/00new/ezglm/libs ** generating debug symbols (dSYM) ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ezglm)