* installing *source* package ‘QFASA’ ... ** package ‘QFASA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs #/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp','-O0 -g', safebounds=FALSE,safeunload=FALSE)" /Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp',safebounds=FALSE,safeunload=FALSE)" using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_ErrorModelSimpleEquant -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c ErrorModelSimpleEquant.cpp -o ErrorModelSimpleEquant.o In file included from ErrorModelSimpleEquant.cpp:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable] int sign; ^ In file included from ErrorModelSimpleEquant.cpp:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable] size_t pow2 = 1; ^ 2 warnings generated. clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ErrorModelSimpleEquant.so ErrorModelSimpleEquant.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation [1] 0 Warning message: In checkMatrixPackageVersion() : Package version inconsistency detected. TMB was built with Matrix version 1.6.2 Current Matrix version is 1.6.3 Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package #/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp','-O0 -g',safebounds=FALSE,safeunload=FALSE)" /Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp',safebounds=FALSE,safeunload=FALSE)" using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_CommonDiet -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CommonDiet.cpp -o CommonDiet.o In file included from CommonDiet.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable] int sign; ^ In file included from CommonDiet.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable] size_t pow2 = 1; ^ 2 warnings generated. clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o CommonDiet.so CommonDiet.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation [1] 0 Warning message: In checkMatrixPackageVersion() : Package version inconsistency detected. TMB was built with Matrix version 1.6.2 Current Matrix version is 1.6.3 Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package # Comment here preserves the prior tab installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/QFASA.Rcheck/00LOCK-QFASA/00new/QFASA/libs ** generating debug symbols (dSYM) ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (QFASA)