- using R Under development (unstable) (2012-02-27 r58511)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'xpose4generic/DESCRIPTION' ... OK
- this is package 'xpose4generic' version '4.3.3'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking whether package 'xpose4generic' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
File 'xpose4generic/R/zzz.R':
.First.lib calls:
require(xpose4data)
Package startup functions should not change the search path.
See section 'Good practice' in ?.onAttach.
add.grid.text: warning in grid.text(new.txt, x = xstart, y = (ystart -
over.space), just = c("left", "top"), check = TRUE, ...): partial
argument match of 'check' to 'check.overlap'
addid: no visible binding for global variable 'obj'
compute.cwres: no visible binding for global variable 'ID'
compute.cwres: no visible binding for global variable 'MDV'
create.mirror: no visible binding for global variable 'seed'
is.cwres.readable.file: no visible global function definition for
'platform'
is.cwres.readable.file: no visible global function definition for
'access'
is.cwres.readable.file: no visible binding for global variable 'unix'
read.cwres.data: warning in read.table(filename, skip = 1, h = T):
partial argument match of 'h' to 'header'
read.cwres.data: warning in read.table(tempfile, skip = 2, h = T):
partial argument match of 'h' to 'header'
read.cwres.data: warning in read.table(deriv.file, skip = 1, h = T):
partial argument match of 'h' to 'header'
xpose.panel.default: warning in panel.bwplot(x, y, horiz = bwhoriz, col
= bwdotcol, pch = bwdotpch, cex = bwdotcex, ratio = bwratio, varwidth
= bwvarwid): partial argument match of 'horiz' to 'horizontal'
xpose.panel.qq: no visible binding for global variable 'ylb'
xpose.panel.qq: no visible binding for global variable 'xlb'
xpose.plot.bw: no visible global function definition for
'reorder.factor'
xpose.plot.default: no visible global function definition for
'reorder.factor'
xpose.plot.histogram: no visible global function definition for
'reorder.factor'
xpose.plot.qq: no visible global function definition for
'reorder.factor'
xpose.plot.splom: no visible global function definition for
'reorder.factor'
- checking Rd files ... NOTE
prepare_Rd: add.grid.table.Rd:108-109: Dropping empty section \details
prepare_Rd: create.xpose.plot.classes.Rd:14-15: Dropping empty section \details
prepare_Rd: create.xpose.plot.classes.Rd:16-17: Dropping empty section \value
prepare_Rd: create.xpose.plot.classes.Rd:23-24: Dropping empty section \note
prepare_Rd: create.xpose.plot.classes.Rd:18-19: Dropping empty section \references
prepare_Rd: create.xpose.plot.classes.Rd:26-27: Dropping empty section \seealso
prepare_Rd: create.xpose.plot.classes.Rd:28-29: Dropping empty section \examples
prepare_Rd: functions.Rd:38-39: Dropping empty section \usage
prepare_Rd: functions.Rd:40-41: Dropping empty section \arguments
prepare_Rd: functions.Rd:51-52: Dropping empty section \seealso
prepare_Rd: functions.Rd:53-54: Dropping empty section \examples
prepare_Rd: internal.functions.Rd:53-54: Dropping empty section \details
prepare_Rd: internal.functions.Rd:60-61: Dropping empty section \note
prepare_Rd: internal.functions.Rd:59: Dropping empty section \author
prepare_Rd: internal.functions.Rd:58: Dropping empty section \references
prepare_Rd: internal.functions.Rd:62: Dropping empty section \seealso
prepare_Rd: internal.functions.Rd:63-64: Dropping empty section \examples
prepare_Rd: print.xpose.multiple.plot.Rd:24-25: Dropping empty section \value
prepare_Rd: print.xpose.multiple.plot.Rd:31-32: Dropping empty section \note
prepare_Rd: print.xpose.multiple.plot.Rd:26-27: Dropping empty section \references
prepare_Rd: print.xpose.multiple.plot.Rd:37-38: Dropping empty section \examples
prepare_Rd: tables.Rd:32-33: Dropping empty section \usage
prepare_Rd: tables.Rd:34-35: Dropping empty section \arguments
prepare_Rd: tables.Rd:44-45: Dropping empty section \seealso
prepare_Rd: tables.Rd:46-47: Dropping empty section \examples
prepare_Rd: xpose.create.title.text.Rd:35-36: Dropping empty section \details
prepare_Rd: xpose.create.title.text.Rd:37-38: Dropping empty section \value
prepare_Rd: xpose.create.title.text.Rd:44-45: Dropping empty section \note
prepare_Rd: xpose.create.title.text.Rd:39-40: Dropping empty section \references
prepare_Rd: xpose.create.title.text.Rd:47-48: Dropping empty section \seealso
prepare_Rd: xpose.create.title.text.Rd:49: Dropping empty section \examples
prepare_Rd: xpose.dev.new.Rd:39-40: Dropping empty section \details
prepare_Rd: xpose.dev.new.Rd:41-42: Dropping empty section \value
prepare_Rd: xpose.dev.new.Rd:44-45: Dropping empty section \note
prepare_Rd: xpose.dev.new.Rd:47-48: Dropping empty section \examples
prepare_Rd: xpose.multiple.plot.Rd:61-62: Dropping empty section \details
prepare_Rd: xpose.multiple.plot.Rd:71-72: Dropping empty section \note
prepare_Rd: xpose.multiple.plot.Rd:66-67: Dropping empty section \references
prepare_Rd: xpose.panel.bw.Rd:162-163: Dropping empty section \details
prepare_Rd: xpose.panel.bw.Rd:164-165: Dropping empty section \value
prepare_Rd: xpose.panel.bw.Rd:168-170: Dropping empty section \examples
prepare_Rd: xpose.panel.default.Rd:497-498: Dropping empty section \details
prepare_Rd: xpose.panel.default.Rd:499-500: Dropping empty section \value
prepare_Rd: xpose.panel.default.Rd:503-505: Dropping empty section \examples
prepare_Rd: xpose.panel.histogram.Rd:114-115: Dropping empty section \details
prepare_Rd: xpose.panel.histogram.Rd:116-117: Dropping empty section \value
prepare_Rd: xpose.panel.histogram.Rd:120-122: Dropping empty section \examples
prepare_Rd: xpose.panel.qq.Rd:64-65: Dropping empty section \details
prepare_Rd: xpose.panel.qq.Rd:66-67: Dropping empty section \value
prepare_Rd: xpose.panel.qq.Rd:75-77: Dropping empty section \examples
prepare_Rd: xpose.panel.splom.Rd:116-117: Dropping empty section \details
prepare_Rd: xpose.panel.splom.Rd:118-119: Dropping empty section \value
prepare_Rd: xpose.panel.splom.Rd:129-131: Dropping empty section \examples
prepare_Rd: xpose.plot.bw.Rd:176-177: Dropping empty section \details
prepare_Rd: xpose.plot.bw.Rd:178-179: Dropping empty section \value
prepare_Rd: xpose.plot.qq.Rd:127-128: Dropping empty section \details
prepare_Rd: xpose.plot.qq.Rd:129-130: Dropping empty section \value
prepare_Rd: xpose.string.print.Rd:23-24: Dropping empty section \details
prepare_Rd: xpose.string.print.Rd:25-26: Dropping empty section \value
prepare_Rd: xpose.string.print.Rd:32-33: Dropping empty section \note
prepare_Rd: xpose.string.print.Rd:27-28: Dropping empty section \references
prepare_Rd: xpose.string.print.Rd:35-36: Dropping empty section \seealso
prepare_Rd: xpose.string.print.Rd:37-38: Dropping empty section \examples
prepare_Rd: xpose.yscale.components.log10.Rd:51-52: Dropping empty section \value
prepare_Rd: xpose.yscale.components.log10.Rd:54-55: Dropping empty section \note
- checking Rd metadata ... OK
- checking Rd cross-references ... WARNING
Missing link(s) in documentation object 'd:/RCompile/CRANpkg/local/2.15/xpose4generic/man/xpose.plot.bw.Rd':
'reorder.factor'
Missing link(s) in documentation object 'd:/RCompile/CRANpkg/local/2.15/xpose4generic/man/xpose.plot.default.Rd':
'reorder.factor'
Missing link(s) in documentation object 'd:/RCompile/CRANpkg/local/2.15/xpose4generic/man/xpose.plot.histogram.Rd':
'reorder.factor'
Missing link(s) in documentation object 'd:/RCompile/CRANpkg/local/2.15/xpose4generic/man/xpose.plot.qq.Rd':
'reorder.factor'
Missing link(s) in documentation object 'd:/RCompile/CRANpkg/local/2.15/xpose4generic/man/xpose.plot.splom.Rd':
'reorder.factor'
See the information in section 'Cross-references' of the 'Writing R
Extensions' manual.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'print.xpose.multiple.plot':
'print.xpose.multiple.plot'
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 3 notes.
See
'd:/Rcompile/CRANpkg/local/2.15/xpose4generic.Rcheck/00check.log'
for details.