• using R Under development (unstable) (2012-02-27 r58511)
  • using platform: x86_64-pc-mingw32 (64-bit)
  • using session charset: ISO8859-1
  • checking for file 'tourr/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'tourr' version '0.5'
  • checking package namespace information ... OK
  • checking package dependencies ... NOTE
    Package suggested but not available for checking: 'rggobi'
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking whether package 'tourr' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • loading checks for arch 'x64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    display_ggobi: warning in require("rggobi", quiet = TRUE): partial
    argument match of 'quiet' to 'quietly'
    display_ggobi : init: no visible global function definition for 'ggobi'
    display_ggobi : init: no visible global function definition for
    'displays'
    display_ggobi : init: no visible global function definition for
    'pmode<-'
    display_ggobi : render_data: no visible global function definition for
    'ggobi_display_set_tour_projection'
    display_pcp : render_data: no visible binding for global variable 'y'
    display_trails : render_data: no visible binding for global variable
    'past_x'
    display_trails : render_data: no visible binding for '<<-' assignment
    to 'past_x'
    display_xy : render_data: warning in draw_tour_axes(proj, labels, limit
    = 1, axes): partial argument match of 'limit' to 'limits'
    plot.path_curve: no visible binding for global variable 'value'
    plot.path_curve: no visible binding for global variable 'obs'
    range_dist: no visible global function definition for 'xy_limits'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... WARNING
    Undocumented S4 classes:
    'tour_path'
    All user-level objects in a package (including S4 classes and methods)
    should have documentation entries.
    See the chapter 'Writing R documentation files' in the 'Writing R
    Extensions' manual.
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ...
    ** running examples for arch 'i386' ... ERROR
    Running examples in 'tourr-Ex.R' failed
    The error most likely occurred in:

    > ### Name: path_curves
    > ### Title: Draw the path that the geodesics took.
    > ### Aliases: path_curves
    >
    > ### ** Examples
    >
    > path1d <- save_history(flea[, 1:6], grand_tour(1), 10)
    > path2d <- save_history(flea[, 1:6], grand_tour(2), 10)
    >
    > if (require("ggplot2")) {
    + plot(path_curves(path1d))
    + plot(path_curves(interpolate(path1d)))
    +
    + plot(path_curves(path2d))
    + plot(path_curves(interpolate(path2d)))
    +
    + # Instead of relying on the built in plot method, you might want to
    + # generate your own. Here are few examples of alternative displays:
    +
    + df <- path_curves(path2d)
    + qplot(step, value, data = df, group = obs:var, geom = "line", colour=var) + facet_wrap( ~ obs)
    +
    + qplot(`1`, `2`, data = cast(df, ... ~ var)) +
    + facet_wrap( ~ step) +
    + coord_equal()
    + }
    Loading required package: ggplot2
    Error in ggplot(data, aesthetics, environment = env) :
    could not find function "cast"
    Calls: qplot -> ggplot
    Execution halted
    ** running examples for arch 'x64' ... ERROR
    Running examples in 'tourr-Ex.R' failed
    The error most likely occurred in:

    > ### Name: path_curves
    > ### Title: Draw the path that the geodesics took.
    > ### Aliases: path_curves
    >
    > ### ** Examples
    >
    > path1d <- save_history(flea[, 1:6], grand_tour(1), 10)
    > path2d <- save_history(flea[, 1:6], grand_tour(2), 10)
    >
    > if (require("ggplot2")) {
    + plot(path_curves(path1d))
    + plot(path_curves(interpolate(path1d)))
    +
    + plot(path_curves(path2d))
    + plot(path_curves(interpolate(path2d)))
    +
    + # Instead of relying on the built in plot method, you might want to
    + # generate your own. Here are few examples of alternative displays:
    +
    + df <- path_curves(path2d)
    + qplot(step, value, data = df, group = obs:var, geom = "line", colour=var) + facet_wrap( ~ obs)
    +
    + qplot(`1`, `2`, data = cast(df, ... ~ var)) +
    + facet_wrap( ~ step) +
    + coord_equal()
    + }
    Loading required package: ggplot2
    Error in ggplot(data, aesthetics, environment = env) :
    could not find function "cast"
    Calls: qplot -> ggplot
    Execution halted