- using R Under development (unstable) (2012-02-27 r58511)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'sfsmisc/DESCRIPTION' ... OK
- this is package 'sfsmisc' version '1.0-19'
- package encoding: latin1
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking whether package 'sfsmisc' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
eaxis: warning in axis(side, at = at.small, label = FALSE, tcl =
f.smalltcl * par("tcl")): partial argument match of 'label' to
'labels'
n.plot: warning in abbreviate(nam, min = 1): partial argument match of
'min' to 'minlength'
p.dchisq: no visible binding for global variable 'x'
p.dgamma: no visible binding for global variable 'x'
pdf.end: no visible global function definition for 'Sys.ps.cmd'
pdf.end: no visible binding for global variable '..pdf.file'
prt.DEBUG: warning in exists("DEBUG", w = 1): partial argument match of
'w' to 'where'
prt.DEBUG: no visible binding for global variable 'DEBUG'
ps.end: no visible global function definition for 'Sys.ps.cmd'
ps.end: no visible binding for global variable '..ps.file'
sHalton: warning in digitsBase(if (leap == 1) n.min:n.max else
seq(n.min, n.max, by = leap), base = base, ndig = nd): partial
argument match of 'ndig' to 'ndigits'
tkdensity: no visible binding for global variable 'x'
tkdensity : replot: no visible binding for '<<-' assignment to 'nbw'
tkdensity : replot: no visible binding for '<<-' assignment to 'xZ'
tkdensity : replot: no visible binding for '<<-' assignment to 'xM'
tkdensity : replot: no visible binding for global variable 'xZ'
tkdensity : replot: no visible binding for global variable 'xM'
tkdensity : replot.maybe: no visible binding for global variable 'nbw'
tkdensity : replot.maybe: no visible binding for global variable 'xZ'
tkdensity : replot.maybe: no visible binding for global variable 'xM'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'hist.bxp':
'hist.bxp'
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... WARNING
'data(package=)' call not declared from: 'nlme'
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking examples ...
** running examples for arch 'i386' ... ERROR
Running examples in 'sfsmisc-Ex.R' failed
The error most likely occurred in:
> ### Name: TA.plot
> ### Title: Tukey-Anscombe Plot (Residual vs. Fitted) of a Linear Model
> ### Aliases: TA.plot
> ### Keywords: models regression
>
> ### ** Examples
>
> data(stackloss)
> TA.plot(lm(stack.loss ~ stack.x))
>
> example(airquality)
arqlty> require(graphics)
arqlty> pairs(airquality, panel = panel.smooth, main = "airquality data")
> summary(lmO <- lm(Ozone ~ ., data= airquality))
Call:
lm(formula = Ozone ~ ., data = airquality)
Residuals:
Min 1Q Median 3Q Max
-37.014 -12.284 -3.302 8.454 95.348
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) -64.11632 23.48249 -2.730 0.00742 **
Solar.R 0.05027 0.02342 2.147 0.03411 *
Wind -3.31844 0.64451 -5.149 1.23e-06 ***
Temp 1.89579 0.27389 6.922 3.66e-10 ***
Month -3.03996 1.51346 -2.009 0.04714 *
Day 0.27388 0.22967 1.192 0.23576
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Residual standard error: 20.86 on 105 degrees of freedom
(42 observations deleted due to missingness)
Multiple R-squared: 0.6249, Adjusted R-squared: 0.6071
F-statistic: 34.99 on 5 and 105 DF, p-value: < 2.2e-16
> TA.plot(lmO)
> TA.plot(lmO, label = "O") # instead of case numbers
>
> if(FALSE) {
+ TA.plot(lm(cost ~ age+type+car.age, claims, weights=number, na.action=na.omit))
+ }
>
> ##--- for aov(.) : -------------
> data(Gun, package = "nlme")
Error in find.package(package, lib.loc, verbose = verbose) :
there is no package called 'nlme'
Calls: data -> find.package
Execution halted
** running examples for arch 'x64' ... ERROR
Running examples in 'sfsmisc-Ex.R' failed
The error most likely occurred in:
> ### Name: TA.plot
> ### Title: Tukey-Anscombe Plot (Residual vs. Fitted) of a Linear Model
> ### Aliases: TA.plot
> ### Keywords: models regression
>
> ### ** Examples
>
> data(stackloss)
> TA.plot(lm(stack.loss ~ stack.x))
>
> example(airquality)
arqlty> require(graphics)
arqlty> pairs(airquality, panel = panel.smooth, main = "airquality data")
> summary(lmO <- lm(Ozone ~ ., data= airquality))
Call:
lm(formula = Ozone ~ ., data = airquality)
Residuals:
Min 1Q Median 3Q Max
-37.014 -12.284 -3.302 8.454 95.348
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) -64.11632 23.48249 -2.730 0.00742 **
Solar.R 0.05027 0.02342 2.147 0.03411 *
Wind -3.31844 0.64451 -5.149 1.23e-06 ***
Temp 1.89579 0.27389 6.922 3.66e-10 ***
Month -3.03996 1.51346 -2.009 0.04714 *
Day 0.27388 0.22967 1.192 0.23576
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Residual standard error: 20.86 on 105 degrees of freedom
(42 observations deleted due to missingness)
Multiple R-squared: 0.6249, Adjusted R-squared: 0.6071
F-statistic: 34.99 on 5 and 105 DF, p-value: < 2.2e-16
> TA.plot(lmO)
> TA.plot(lmO, label = "O") # instead of case numbers
>
> if(FALSE) {
+ TA.plot(lm(cost ~ age+type+car.age, claims, weights=number, na.action=na.omit))
+ }
>
> ##--- for aov(.) : -------------
> data(Gun, package = "nlme")
Error in find.package(package, lib.loc, verbose = verbose) :
there is no package called 'nlme'
Calls: data -> find.package
Execution halted