- using R Under development (unstable) (2012-02-27 r58511)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- using options '--no-examples --no-tests --no-vignettes'
- checking for file 'mixtools/DESCRIPTION' ... OK
- this is package 'mixtools' version '0.4.4'
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
- checking whether package 'mixtools' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
File 'mixtools/R/zzz.R':
.First.lib calls:
cat(pkg, "package version", info[, "Version"], " Released", info[, "Date"], "\n")
cat("Type help(package=\"mixtools\") to get started.\n")
cat("This package is based upon work supported by the National Science Foundation under Grant No. SES-0518772.\n")
Package startup functions should use 'packageStartupMessage' to
generate messages.
See section 'Good practice' in ?.onAttach.
boot.comp: warning in try(repnormmixEM(x = y, k = (i + 1), arbmean =
arbmean, arbvar = arbvar, ...), silen = TRUE): partial argument match
of 'silen' to 'silent'
normmixrm.sim: warning in sample(m, n, rep = TRUE, prob = lambda):
partial argument match of 'rep' to 'replace'
rmvnormmix: warning in sample(m, n, rep = TRUE, prob = lambda): partial
argument match of 'rep' to 'replace'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... WARNING
Warning: large data file(s) saved inefficiently:
size ASCII compress
RanEffdata.RData 124Kb FALSE none
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
RanEffdata.RData 124Kb 62Kb xz
RodFramedata.RData 33Kb 6Kb bzip2
Waterdata.RData 17Kb 4Kb bzip2
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... NOTE
File 'd:/Rcompile/CRANpkg/lib/2.15/mixtools/libs/i386/mixtools.dll':
Found 'abort', possibly from 'abort' (C)
File 'd:/Rcompile/CRANpkg/lib/2.15/mixtools/libs/x64/mixtools.dll':
Found 'abort', possibly from 'abort' (C)
Compiled code should not call functions which might terminate R nor
write to stdout/stderr instead of to the console. The detected symbols
are linked into the code but might come from libraries and not actually
be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
- checking sizes of PDF files under 'inst/doc' ... NOTE
'qpdf' made some significant size reductions:
compacted 'vignette.pdf' from 667Kb to 348Kb
consider running tools::compactPDF() on these files
- checking installed files from 'inst/doc' ... OK
- checking examples ... SKIPPED
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking running R code from vignettes ... SKIPPED
- checking re-building of vignettes ... SKIPPED
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 4 notes.
See
'd:/Rcompile/CRANpkg/local/2.15/mixtools.Rcheck/00check.log'
for details.
- using check arguments '--no-examples --no-tests --no-vignettes'