• using R Under development (unstable) (2012-02-27 r58511)
• using platform: x86_64-pc-mingw32 (64-bit)
• using session charset: ISO8859-1
• checking for file 'gstat/DESCRIPTION' ... OK
• this is package 'gstat' version '1.0-10'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking whether package 'gstat' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
• loading checks for arch 'x64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... NOTE
  File 'd:/Rcompile/CRANpkg/lib/2.15/gstat/libs/i386/gstat.dll':
  Found 'abort', possibly from 'abort' (C)
  File 'd:/Rcompile/CRANpkg/lib/2.15/gstat/libs/x64/gstat.dll':
  Found 'abort', possibly from 'abort' (C)
  
  Compiled code should not call functions which might terminate R nor
  write to stdout/stderr instead of to the console. The detected symbols
  are linked into the code but might come from libraries and not actually
  be called.
  
  See 'Writing portable packages' in the 'Writing R Extensions' manual.
• checking sizes of PDF files under 'inst/doc' ... OK
• checking installed files from 'inst/doc' ... OK
• checking examples ...
  ** running examples for arch 'i386' ... OK
  ** running examples for arch 'x64' ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ...
  ** running tests for arch 'i386' OK
  Running 'blockkr.R'
  Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'covtable.R'
  Comparing 'covtable.Rout' to 'covtable.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'cv.R'
  Comparing 'cv.Rout' to 'cv.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  59,61d58
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  76,77c73,74
  < Median :5.767 Median :0.006181 Median :5.787 Median : 0.010332
  < Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007156
  ---
  > Median :5.767 Median :0.006181 Median :5.787 Median : 0.010331
  > Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007157
  81c78
  < Min. :-5.45653 Min. :1.000 Min. :178605 Min. :329714
  ---
  > Min. :-5.45652 Min. :1.000 Min. :178605 Min. :329714
  87,89d83
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  Running 'cv3d.R'
  Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ...11c11
  < as.Date, as.Date.numeric
  ---
  > as.Date
  20c20
  < 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85076
  ---
  > 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85075
  23,28c23,28
  < Min. :-5.1678 Min. : 1.00 Min. :0.006784 Min. :0.003404
  < 1st Qu.:-1.8749 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  < Median : 0.2453 Median :25.50 Median :0.486683 Median :0.452500
  < Mean : 0.0167 Mean :25.50 Mean :0.499664 Mean :0.496887
  < 3rd Qu.: 2.0201 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  < Max. : 7.3541 Max. :50.00 Max. :0.987538 Max. :0.987169
  ---
  > Min. :-5.16777 Min. : 1.00 Min. :0.006784 Min. :0.003404
  > 1st Qu.:-1.87495 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  > Median : 0.24533 Median :25.50 Median :0.486684 Median :0.452500
  > Mean : 0.01669 Mean :25.50 Mean :0.499664 Mean :0.496887
  > 3rd Qu.: 2.02008 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  > Max. : 7.35414 Max. :50.00 Max. :0.987539 Max. :0.987169
  Running 'fit.R'
  Comparing 'fit.Rout' to 'fit.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'krige0.R'
  Comparing 'krige0.Rout' to 'krige0.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'line.R'
  Comparing 'line.Rout' to 'line.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  34c34
  < a 180333 332167 6.1618 0.0080251
  ---
  > a 180333 332167 6.1618 0.008025
  72c72
  < 1 (0, 0) 6.1618 0.0080251
  ---
  > 1 (0, 0) 6.1618 0.008025
  148,149c148,149
  < a 180333 332167 6.1618 0.0080251
  < b 181000 333000 5.7060 0.0110429
  ---
  > a 180333 332167 6.1618 0.008025
  > b 181000 333000 5.7060 0.011043
  Running 'merge.R'
  Comparing 'merge.Rout' to 'merge.Rout.save' ...15c15
  < as.Date, as.Date.numeric
  ---
  > as.Date
  147c147
  < 2.10985743e-016 0.5 4
  ---
  > 0 0.5 4
  208,211c208,211
  < row 0: 0.5 6.9388939e-017
  < row 1: 0.5 -9.71445147e-017
  < row 2: -4.16333634e-017 0.5
  < row 3: 2.77555756e-017 0.5
  ---
  > row 0: 0.5 -9.71445147e-17
  > row 1: 0.5 8.32667268e-17
  > row 2: 1.38777878e-17 0.5
  > row 3: -2.77555756e-17 0.5
  Running 'na.action.R'
  Comparing 'na.action.Rout' to 'na.action.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'rings.R'
  Comparing 'rings.Rout' to 'rings.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'sim.R'
  Comparing 'sim.Rout' to 'sim.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  23,25c23,25
  < 2 180310 332189 619.6634 802.32709 678.695 774.714 587.487 767.488 672.648
  < 3 180205 331707 253.9294 3.85553 421.666 373.561 130.796 150.749 282.151
  < 4 178673 330066 844.6284 1226.33655 561.425 337.763 579.610 620.360 791.288
  ---
  > 2 180310 332189 619.6634 802.32715 678.695 774.714 587.487 767.488 672.648
  > 3 180205 331707 253.9294 3.85552 421.666 373.561 130.796 150.749 282.151
  > 4 178673 330066 844.6284 1226.33667 561.425 337.763 579.610 620.360 791.288
  Running 'unproj.R'
  Comparing 'unproj.Rout' to 'unproj.Rout.save' ...6,7c6,7
  < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
  < Path to GDAL shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/gdal
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  9c9
  < Path to PROJ.4 shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/proj
  ---
  > Path to PROJ.4 shared files: (autodetected)
  21c21
  < as.Date, as.Date.numeric
  ---
  > as.Date
  48c48
  < Package 'spam' is loaded. Spam version 0.28-0 (2012-01-11).
  ---
  > Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
  Running 'variogram.R'
  Comparing 'variogram.Rout' to 'variogram.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'vdist.R'
  Comparing 'vdist.Rout' to 'vdist.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  29c29
  < 1 (180260, 331300) 5.641176 1.100095
  ---
  > 1 (180260, 331300) 5.50671 1.100095
  Running 'windst.R'
  Comparing 'windst.Rout' to 'windst.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  24d23
  < There were 50 or more warnings (use warnings() to see the first 50)
  80,81c79,80
  < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
  < Path to GDAL shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/gdal
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  83,87c82,83
  < Path to PROJ.4 shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/proj
  < Checking rgeos availability: FALSE
  < Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  < which has a restricted licence. It is disabled by default;
  < to enable gpclib, type gpclibPermit()
  ---
  > Path to PROJ.4 shared files: (autodetected)
  > Checking rgeos availability: TRUE
  ** running tests for arch 'x64' OK
  Running 'blockkr.R'
  Comparing 'blockkr.Rout' to 'blockkr.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'covtable.R'
  Comparing 'covtable.Rout' to 'covtable.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'cv.R'
  Comparing 'cv.Rout' to 'cv.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  59,61d58
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  76,77c73,74
  < Median :5.767 Median :0.006181 Median :5.787 Median : 0.010332
  < Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007156
  ---
  > Median :5.767 Median :0.006181 Median :5.787 Median : 0.010331
  > Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007157
  81c78
  < Min. :-5.45653 Min. :1.000 Min. :178605 Min. :329714
  ---
  > Min. :-5.45652 Min. :1.000 Min. :178605 Min. :329714
  87,89d83
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  Running 'cv3d.R'
  Comparing 'cv3d.Rout' to 'cv3d.Rout.save' ...11c11
  < as.Date, as.Date.numeric
  ---
  > as.Date
  20c20
  < 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85076
  ---
  > 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85075
  23,28c23,28
  < Min. :-5.1678 Min. : 1.00 Min. :0.006784 Min. :0.003404
  < 1st Qu.:-1.8749 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  < Median : 0.2453 Median :25.50 Median :0.486683 Median :0.452500
  < Mean : 0.0167 Mean :25.50 Mean :0.499664 Mean :0.496887
  < 3rd Qu.: 2.0201 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  < Max. : 7.3541 Max. :50.00 Max. :0.987538 Max. :0.987169
  ---
  > Min. :-5.16777 Min. : 1.00 Min. :0.006784 Min. :0.003404
  > 1st Qu.:-1.87495 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  > Median : 0.24533 Median :25.50 Median :0.486684 Median :0.452500
  > Mean : 0.01669 Mean :25.50 Mean :0.499664 Mean :0.496887
  > 3rd Qu.: 2.02008 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  > Max. : 7.35414 Max. :50.00 Max. :0.987539 Max. :0.987169
  Running 'fit.R'
  Comparing 'fit.Rout' to 'fit.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'krige0.R'
  Comparing 'krige0.Rout' to 'krige0.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'line.R'
  Comparing 'line.Rout' to 'line.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'merge.R'
  Comparing 'merge.Rout' to 'merge.Rout.save' ...15c15
  < as.Date, as.Date.numeric
  ---
  > as.Date
  208,211c208,211
  < row 0: 0.5 -9.71445147e-017
  < row 1: 0.5 8.32667268e-017
  < row 2: 1.38777878e-017 0.5
  < row 3: -2.77555756e-017 0.5
  ---
  > row 0: 0.5 -9.71445147e-17
  > row 1: 0.5 8.32667268e-17
  > row 2: 1.38777878e-17 0.5
  > row 3: -2.77555756e-17 0.5
  Running 'na.action.R'
  Comparing 'na.action.Rout' to 'na.action.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'rings.R'
  Comparing 'rings.Rout' to 'rings.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'sim.R'
  Comparing 'sim.Rout' to 'sim.Rout.save' ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'unproj.R'
  Comparing 'unproj.Rout' to 'unproj.Rout.save' ...6,7c6,7
  < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
  < Path to GDAL shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/gdal
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  9c9
  < Path to PROJ.4 shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/proj
  ---
  > Path to PROJ.4 shared files: (autodetected)
  21c21
  < as.Date, as.Date.numeric
  ---
  > as.Date
  48c48
  < Package 'spam' is loaded. Spam version 0.28-0 (2012-01-11).
  ---
  > Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
  Running 'variogram.R'
  Comparing 'variogram.Rout' to 'variogram.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running 'vdist.R'
  Comparing 'vdist.Rout' to 'vdist.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  29c29
  < 1 (180260, 331300) 5.641176 1.100095
  ---
  > 1 (180260, 331300) 5.50671 1.100095
  Running 'windst.R'
  Comparing 'windst.Rout' to 'windst.Rout.save' ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  24d23
  < There were 50 or more warnings (use warnings() to see the first 50)
  80,81c79,80
  < Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
  < Path to GDAL shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/gdal
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  83,87c82,83
  < Path to PROJ.4 shared files: d:/temp/RtmpyqCC9X/RLIBS_1a384c401d05/rgdal/proj
  < Checking rgeos availability: FALSE
  < Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  < which has a restricted licence. It is disabled by default;
  < to enable gpclib, type gpclibPermit()
  ---
  > Path to PROJ.4 shared files: (autodetected)
  > Checking rgeos availability: TRUE
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  'd:/Rcompile/CRANpkg/local/2.15/gstat.Rcheck/00check.log'
  for details.