• using R Under development (unstable) (2013-06-14 r62964)
  • using platform: x86_64-w64-mingw32 (64-bit)
  • using session charset: ISO8859-1
  • checking for file 'PKmodelFinder/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'PKmodelFinder' version '1.1'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking whether package 'PKmodelFinder' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    PKmodelFinder : ID.plot: warning in ggroup(cont = window, anchor =
    c(-1, 1)): partial argument match of 'cont' to 'container'
    PKmodelFinder : ID.plot: warning in ggroup(cont = BigGroup, horizontal
    = FALSE): partial argument match of 'cont' to 'container'
    PKmodelFinder : DVvsPRED.plot: warning in ggroup(cont = win): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : DVvsPRED.plot: warning in ggroup(horizontal = FALSE,
    cont = BigGroup): partial argument match of 'cont' to 'container'
    PKmodelFinder : DVvsRES.plot: warning in ggroup(cont = win): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : DVvsRES.plot: warning in ggroup(horizontal = FALSE,
    cont = BigGroup): partial argument match of 'cont' to 'container'
    PKmodelFinder : TIMEvsRES.plot: warning in ggroup(cont = win): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : TIMEvsRES.plot: warning in ggroup(horizontal = FALSE,
    cont = BigGroup): partial argument match of 'cont' to 'container'
    PKmodelFinder : TIMEvsDVandPRED.plot: warning in ggroup(cont = window,
    anchor = c(-1, 1)): partial argument match of 'cont' to 'container'
    PKmodelFinder : TIMEvsDVandPRED.plot: warning in ggroup(cont =
    BigGroup, horizontal = FALSE): partial argument match of 'cont' to
    'container'
    PKmodelFinder : EBEvsCOV.plot: warning in ggroup(cont = win): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : EBEvsCOV.plot: warning in ggroup(horizontal = FALSE,
    cont = BigGroup): partial argument match of 'cont' to 'container'
    PKmodelFinder : setInitial: warning in ggroup(horizontal = FALSE, cont
    = initial.GUI): partial argument match of 'cont' to 'container'
    PKmodelFinder : setInitial : <anonymous>: warning in ggroup(horizontal
    = FALSE, cont = output.window): partial argument match of 'cont' to
    'container'
    PKmodelFinder : setInitial: warning in gframe(param.list[i], cont = g):
    partial argument match of 'cont' to 'container'
    PKmodelFinder : setInitial: warning in gframe("", cont = g): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : MakeDose: warning in ggroup(horizontal = FALSE, cont =
    tt): partial argument match of 'cont' to 'container'
    PKmodelFinder : MakeDose: warning in gframe("Choose Variable
    Properties", cont = g): partial argument match of 'cont' to
    'container'
    PKmodelFinder : MakeDose: warning in gframe(Var.Name[i], cont = g):
    partial argument match of 'cont' to 'container'
    PKmodelFinder : MakeDose: warning in gframe("", cont = g): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : MakeDV: warning in ggroup(horizontal = FALSE, cont =
    tt): partial argument match of 'cont' to 'container'
    PKmodelFinder : MakeDV: warning in gframe("Choose Variable Properties",
    cont = g): partial argument match of 'cont' to 'container'
    PKmodelFinder : MakeDV: warning in gframe(Var.Name[i], cont = g):
    partial argument match of 'cont' to 'container'
    PKmodelFinder : MakeDV: warning in gframe("", cont = g): partial
    argument match of 'cont' to 'container'
    PKmodelFinder : PrintResult: warning in ggroup(horizontal = FALSE, cont
    = output.window): partial argument match of 'cont' to 'container'
    PKmodelFinder: warning in gmenu(menu.list, cont = PKSAEM.win): partial
    argument match of 'cont' to 'container'
    PKmodelFinder: warning in ggroup(cont = PKSAEM.win): partial argument
    match of 'cont' to 'container'
    PKmodelFinder: warning in ggroup(horizontal = FALSE, cont = Group1):
    partial argument match of 'cont' to 'container'
    PKmodelFinder: warning in ggroup(horizontal = FALSE, cont = Group2):
    partial argument match of 'cont' to 'container'
    PKmodelFinder : I.Comp1.FO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : One.FirstOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : One.FirstOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : One.FirstOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp1.IVbolus.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : One.IVbolus.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : One.IVbolus.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : One.IVbolus.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp1.IVinf.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : One.IVinf.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : One.IVinf.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : One.IVinf.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Comp1.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp1.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp1.ZO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp2.FO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp2.IVbolus.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Two.IVbolus.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Two.IVbolus.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : I.Comp2.IVinf.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Two.IVinf.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Two.IVinf.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Two.IVinf.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Comp2.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp2.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp2.ZO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp3.FO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp3.IVbolus.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Three.IVbolus.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Three.IVbolus.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Three.IVbolus.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : I.Comp3.IVinf.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Three.IVinf.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Three.IVinf.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Three.IVinf.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Comp3.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp3.ZO.L: no visible binding for global variable
    'Tk0'
    PKmodelFinder : I.Comp3.ZO.L.optim: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global
    variable 'm'
    PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global
    variable 'K'
    PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : ID.plot: no visible binding for global variable
    'Data.Info'
    PKmodelFinder : ID.plot : updatePlot: no visible binding for global
    variable 'Data.Info'
    PKmodelFinder : ID.plot : updatePlot: no visible binding for global
    variable 'IDlist'
    PKmodelFinder : ID.plot : Plot1: no visible binding for global variable
    'Data.Info'
    PKmodelFinder : ID.plot : Plot2: no visible binding for global variable
    'Data.Info'
    PKmodelFinder : ID.plot: no visible binding for '<<-' assignment to
    'IDlist'
    PKmodelFinder : ID.plot: no visible binding for global variable
    'IDlist'
    PKmodelFinder : DVvsPRED.plot : updatePlot: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : DVvsPRED.plot : updatePlot: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : DVvsRES.plot : updatePlot: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : DVvsRES.plot : updatePlot: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : DVvsRES.plot : Plot1: no visible binding for global
    variable 'OUTPUT.tot'
    PKmodelFinder : DVvsRES.plot : Plot1: no visible binding for global
    variable 'RUN.id'
    PKmodelFinder : TIMEvsRES.plot : updatePlot: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : TIMEvsRES.plot : updatePlot: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global
    variable 'OUTPUT.tot'
    PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global
    variable 'RUN.id'
    PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding
    for global variable 'OUTPUT.tot'
    PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding
    for global variable 'RUN.id'
    PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding
    for global variable 'IDlist'
    PKmodelFinder : TIMEvsDVandPRED.plot : Plot1: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : TIMEvsDVandPRED.plot : Plot1: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : TIMEvsDVandPRED.plot : Plot2: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : TIMEvsDVandPRED.plot : Plot2: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for '<<-'
    assignment to 'IDlist'
    PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global
    variable 'IDlist'
    PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable
    'OUTPUT.tot'
    PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable
    'RUN.id'
    PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable
    'Data.Info'
    PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable
    'tot.data'
    PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable
    'Var.Prop'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    '<<-' assignment to 'Y'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    '<<-' assignment to 'X'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    global variable 'OUTPUT.tot'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    global variable 'RUN.id'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    global variable 'X'
    PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for
    global variable 'Y'
    PKmodelFinder : EBEvsCOV.plot : linearD: no visible binding for global
    variable 'Y'
    PKmodelFinder : EBEvsCOV.plot : linearD: no visible binding for global
    variable 'X'
    PKmodelFinder : dataMake: no visible binding for global variable
    'Dose.Info'
    PKmodelFinder : dataMake: no visible binding for global variable
    'Data.Info'
    PKmodelFinder : setModel: no visible binding for global variable
    'tot.data'
    PKmodelFinder : setModel: no visible binding for '<<-' assignment to
    'tot.data'
    PKmodelFinder : setInitial: no visible binding for global variable
    'tot.data'
    PKmodelFinder : setInitial: no visible binding for global variable
    'admin'
    PKmodelFinder : setInitial: no visible binding for global variable
    'param.list'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'tot.data'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'param.list'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for '<<-'
    assignment to 'Init.v'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for '<<-'
    assignment to 'tot.data'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'comp'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'admin'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'elim'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'model'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'OUTPUT.tot'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'RUN.id'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for '<<-'
    assignment to 'OUTPUT.tot'
    PKmodelFinder : setInitial : <anonymous>: no visible binding for global
    variable 'output.txt1'
    PKmodelFinder : Simulation: no visible binding for global variable
    'tot.data'
    PKmodelFinder : Simulation: no visible binding for global variable
    'Init.v'
    PKmodelFinder : Simulation : fr: no visible binding for global variable
    'tot.data'
    PKmodelFinder : Simulation: no visible global function definition for
    'loglike.ind.N'
    PKmodelFinder : Simulation: no visible binding for '<<-' assignment to
    'tot.data'
    PKmodelFinder : Simulation: no visible binding for '<<-' assignment to
    'L.KEEP'
    PKmodelFinder : FisherInfo: no visible binding for global variable
    'tot.data'
    PKmodelFinder : FisherInfo: no visible binding for '<<-' assignment to
    'Keep.env'
    PKmodelFinder : FisherInfo: no visible binding for '<<-' assignment to
    'tot.data'
    PKmodelFinder : Pred: no visible binding for global variable 'tot.data'
    PKmodelFinder : Pred: no visible binding for '<<-' assignment to
    'tot.data'
    PKmodelFinder : MakeDose : <anonymous>: no visible binding for '<<-'
    assignment to 'Dose.Info'
    PKmodelFinder : MakeDV : <anonymous>: no visible binding for '<<-'
    assignment to 'Data.Info'
    PKmodelFinder : MakeDV : <anonymous>: no visible binding for '<<-'
    assignment to 'Var.Prop'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'model'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'param.list'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'result'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'OUTPUT.tot'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'RUN.id'
    PKmodelFinder : PrintResult: no visible binding for '<<-' assignment to
    'OUTPUT.tot'
    PKmodelFinder : PrintResult: no visible binding for global variable
    'output.txt1'
    PKmodelFinder : OpenDoseFile: no visible binding for '<<-' assignment
    to 'file.dose'
    PKmodelFinder : OpenDoseFile: no visible binding for global variable
    'file.dose'
    PKmodelFinder : OpenDataFile: no visible binding for '<<-' assignment
    to 'file.dose'
    PKmodelFinder : OpenDataFile: no visible binding for global variable
    'file.dose'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'RUN.id'
    PKmodelFinder : runPK: no visible binding for global variable 'RUN.id'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'comp'
    PKmodelFinder : runPK: no visible binding for global variable 'level1'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'admin'
    PKmodelFinder : runPK: no visible binding for global variable 'level2'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'elim'
    PKmodelFinder : runPK: no visible binding for global variable 'level3'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'error'
    PKmodelFinder : runPK: no visible binding for global variable 'level4'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'K'
    PKmodelFinder : runPK: no visible binding for global variable 'KWidget'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'm'
    PKmodelFinder : runPK: no visible binding for global variable 'mWidget'
    PKmodelFinder : runPK: no visible binding for global variable 'comp'
    PKmodelFinder : runPK: no visible binding for global variable 'admin'
    PKmodelFinder : runPK: no visible binding for global variable 'elim'
    PKmodelFinder : runPK: no visible binding for global variable
    'Dose.Info'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'model'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'param.list'
    PKmodelFinder : runPK: no visible binding for global variable 'model'
    PKmodelFinder : runPK : <anonymous>: no visible binding for '<<-'
    assignment to 'Tk0'
    PKmodelFinder : runPK : <anonymous>: no visible binding for global
    variable 'model'
    PKmodelFinder : runPK: no visible binding for '<<-' assignment to
    'result'
    PKmodelFinder: no visible binding for '<<-' assignment to 'RUN.id'
    PKmodelFinder: no visible binding for '<<-' assignment to 'OUTPUT.tot'
    PKmodelFinder: no visible binding for '<<-' assignment to 'PKSAEM.win'
    PKmodelFinder : <anonymous>: no visible binding for global variable
    'NONMEM.win'
    PKmodelFinder: no visible binding for global variable 'PKSAEM.win'
    PKmodelFinder: no visible binding for '<<-' assignment to 'level1'
    PKmodelFinder: no visible binding for '<<-' assignment to 'level2'
    PKmodelFinder: no visible binding for '<<-' assignment to 'level3'
    PKmodelFinder: no visible binding for '<<-' assignment to 'level4'
    PKmodelFinder: no visible binding for global variable 'level1'
    PKmodelFinder: no visible binding for global variable 'level2'
    PKmodelFinder: no visible binding for global variable 'level3'
    PKmodelFinder: no visible binding for global variable 'level4'
    PKmodelFinder: no visible binding for '<<-' assignment to 'KWidget'
    PKmodelFinder: no visible binding for global variable 'KWidget'
    PKmodelFinder: no visible binding for '<<-' assignment to 'mWidget'
    PKmodelFinder: no visible binding for global variable 'mWidget'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    'd:/Rcompile/CRANpkg/local/3.1/PKmodelFinder.Rcheck/00check.log'
    for details.