• using R Under development (unstable) (2012-02-27 r58511)
• using platform: x86_64-pc-mingw32 (64-bit)
• using session charset: ISO8859-1
• checking for file 'Modalclust/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'Modalclust' version '0.2'
• checking package dependencies ... NOTE
  Package suggested but not available for checking: 'multicore'
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
• checking whether package 'Modalclust' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
• loading checks for arch 'x64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  modalclust: no visible global function definition for 'collect'
  phmac: no visible global function definition for 'collect'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under 'inst/doc' ... NOTE
  'qpdf' made some significant size reductions:
  compacted 'Modalclust.pdf' from 958Kb to 183Kb
  compacted 'modalclust1.pdf' from 252Kb to 86Kb
  consider running tools::compactPDF() on these files
• checking installed files from 'inst/doc' ... OK
• checking examples ...
  ** running examples for arch 'i386' ... WARNING
  Found the following significant warnings:
  
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Deprecated functions may be defunct as soon as of the next release of
  R.
  See ?Deprecated.
  ** running examples for arch 'x64' ... WARNING
  Found the following significant warnings:
  
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<data.frame>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Warning: sd(<matrix>) is deprecated.
  Deprecated functions may be defunct as soon as of the next release of
  R.
  See ?Deprecated.
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK
  WARNING: There were 2 warnings.
  NOTE: There were 4 notes.
  See
  'd:/Rcompile/CRANpkg/local/2.15/Modalclust.Rcheck/00check.log'
  for details.