- using R Under development (unstable) (2012-02-27 r58511)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'Metabonomic/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'Metabonomic' version '3.5'
- checking package dependencies ... NOTE
Package suggested but not available for checking: 'kopls'
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
- checking whether package 'Metabonomic' can be installed ... OK
- checking installed package size ... NOTE
installed size is 8.9Mb
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
Baseline.Correction: no visible binding for global variable 'datos'
Baseline.Correction : plotFunction: no visible binding for global
variable 'datos'
Baseline.Correction : plotFunction: no visible binding for '<<-'
assignment to 'a3'
Baseline.Correction : plotFunction: no visible binding for global
variable 'a3'
Baseline.Correction : change.color.bakground : onCancel: no visible
binding for '<<-' assignment to 'ReturnVal'
Baseline.Correction : modalDialog4 : onOK: no visible binding for '<<-'
assignment to 'main'
Baseline.Correction : Zoom : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Baseline.Correction : Text.size : onCancel: no visible binding for
'<<-' assignment to 'ReturnVal'
Baseline.Correction : Text.size: no visible binding for global variable
'ReturnVal'
Baseline.Correction : onok: no visible binding for global variable 'a3'
Baseline.Correction : onok: no visible binding for '<<-' assignment to
'datos'
Baseline.Correction : onok: no visible binding for global variable
'datos'
Baseline.Correction : onok: no visible binding for '<<-' assignment to
'memory'
Baseline.Correction : onok: no visible binding for global variable
'memory'
Baseline.Correction : onok: no visible binding for '<<-' assignment to
'memory.data'
Baseline.Correction : onok: no visible binding for global variable
'memory.data'
Baseline.Correction : <anonymous>: no visible binding for global
variable 'main'
Import.data: no visible binding for '<<-' assignment to 'memory'
Import.data: no visible binding for '<<-' assignment to 'file.out'
Manual.cut: no visible binding for global variable 'console'
Manual.cut: no visible binding for '<<-' assignment to 'memory'
Manual.cut: no visible binding for global variable 'memory'
Manual.cut: no visible binding for global variable 'datos'
Manual.cut : cut : onOK: no visible binding for '<<-' assignment to
'xlim'
Manual.cut : cut : onOK: no visible binding for '<<-' assignment to
'xlim2'
Manual.cut : cut : onCancel: no visible binding for '<<-' assignment to
'ReturnVal'
Manual.cut: no visible binding for global variable 'xlim'
Manual.cut: no visible binding for global variable 'xlim2'
Manual.cut: no visible binding for '<<-' assignment to 'datos'
Manual.cut: no visible binding for '<<-' assignment to 'memory.data'
Manual.cut: no visible binding for global variable 'memory.data'
Met.Aligm: no visible binding for global variable 'console'
Met.Aligm: no visible binding for '<<-' assignment to 'memory'
Met.Aligm: no visible binding for global variable 'memory'
Met.Aligm: no visible binding for '<<-' assignment to 'memory.data'
Met.Aligm: no visible binding for global variable 'memory.data'
Met.B.STAT: no visible binding for global variable 'console'
Met.B.STAT: no visible binding for global variable 'categoria'
Met.B.STAT : f2a: no visible binding for '<<-' assignment to
'plotFunction'
Met.B.STAT : f2a: no visible global function definition for
'plotFunction'
Met.B.STAT : f2a: no visible binding for global variable 'xlab'
Met.B.STAT : f2a: no visible binding for global variable 'ylab'
Met.B.STAT : f2a : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.B.STAT : f2a : change.color.bakground : onOK: no visible binding
for global variable 'xlab'
Met.B.STAT : f2a : change.color.bakground : onOK: no visible binding
for global variable 'ylab'
Met.B.STAT : f2a : change.color.bakground : onCancel: no visible
binding for '<<-' assignment to 'ReturnVal'
Met.B.STAT : f2a : met : OnOK: no visible global function definition
for 'plotFunction'
Met.B.STAT : f2a : met : OnOK: no visible binding for global variable
'xlab'
Met.B.STAT : f2a : met : OnOK: no visible binding for global variable
'ylab'
Met.B.STAT : f2a : by.name: no visible global function definition for
'plotFunction'
Met.B.STAT : f2a : by.name: no visible binding for global variable
'xlab'
Met.B.STAT : f2a : by.name: no visible binding for global variable
'ylab'
Met.B.STAT : f2a : by.type: no visible binding for global variable
'categoria'
Met.B.STAT : f2a : by.type: no visible global function definition for
'plotFunction'
Met.B.STAT : f2a : by.type: no visible binding for global variable
'xlab'
Met.B.STAT : f2a : by.type: no visible binding for global variable
'ylab'
Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for '<<-'
assignment to 'xlab'
Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for '<<-'
assignment to 'ylab'
Met.B.STAT : f2a : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for global
variable 'xlab'
Met.B.STAT : f2a : modalDialog4 : onOK: no visible binding for global
variable 'ylab'
Met.B.STAT : f2a : Text.size : onOK: no visible global function
definition for 'plotFunction'
Met.B.STAT : f2a : Text.size : onOK: no visible binding for global
variable 'xlab'
Met.B.STAT : f2a : Text.size : onOK: no visible binding for global
variable 'ylab'
Met.B.STAT : f2a : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.B.STAT : f2a : Text.size: no visible binding for global variable
'ReturnVal'
Met.B.STAT : f2a : CopyToClip: no visible global function definition
for 'plotFunction'
Met.B.STAT : f2a : CopyToClip: no visible binding for global variable
'xlab'
Met.B.STAT : f2a : CopyToClip: no visible binding for global variable
'ylab'
Met.B.STAT : f2a : <anonymous>: no visible binding for global variable
'xlab'
Met.B.STAT : f2a : <anonymous>: no visible binding for global variable
'ylab'
Met.Binning: no visible binding for global variable 'console'
Met.Binning: no visible binding for '<<-' assignment to 'memory'
Met.Binning: no visible binding for global variable 'memory'
Met.Binning: no visible binding for '<<-' assignment to 'memory.data'
Met.Binning: no visible binding for global variable 'memory.data'
Met.KNN: no visible binding for global variable 'console'
Met.KNN : Met.text.check : onOK: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.KNN : Met.text.check : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.KNN : Met.text.check: no visible binding for global variable
'ReturnVal'
Met.KNN : Met.model: no visible binding for global variable 'clase'
Met.KNN : Met.model : onOK: no visible binding for global variable
'clase'
Met.KNN : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.KNN : Met.model : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.KNN: no visible binding for global variable 'clase'
Met.KNN: no visible binding for global variable 'categoria'
Met.KNN: no visible binding for global variable 'm.model'
Met.KNN: no visible binding for global variable 'elementos'
Met.KNN: no visible binding for global variable 'ReturnVal'
Met.LDA: no visible binding for global variable 'console'
Met.LDA : Met.model: no visible binding for global variable 'clase'
Met.LDA : Met.model : onOK: no visible binding for global variable
'clase'
Met.LDA : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.LDA : Met.model : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.LDA : f2: no visible binding for '<<-' assignment to 'plotFunction'
Met.LDA : f2: no visible global function definition for 'plotFunction'
Met.LDA : f2 : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.LDA : f2 : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.LDA : f2 : by.name: no visible global function definition for
'plotFunction'
Met.LDA : f2 : by.type: no visible binding for global variable
'categoria'
Met.LDA : f2 : by.type: no visible global function definition for
'plotFunction'
Met.LDA : f2 : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.LDA : f2 : Text.size : onOK: no visible global function definition
for 'plotFunction'
Met.LDA : f2 : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.LDA : f2 : Text.size: no visible binding for global variable
'ReturnVal'
Met.LDA : f2 : CopyToClip: no visible global function definition for
'plotFunction'
Met.LDA : f2 : Comp : onOK: no visible global function definition for
'plotFunction'
Met.LDA : f2 : Comp : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.LDA : f3: no visible binding for '<<-' assignment to 'plotFunction'
Met.LDA : f3 : <anonymous>: warning in scatterplot3d(a[, PLSC$a], a[,
PLSC$b], a[, PLSC$d], type = "p", color = color2, pch = 10, box =
TRUE, cex.axis = size$cex.axis, cex.lab = size$cex.lab, cex.main =
size$cex.main, cex.sub = size$cex.sub, cex = size$cex, main = main,
sub = subt, xlim = NULL, ylim = NULL, zlim = NULL, col.axis =
col$axis, col.lab = col$lab, col.main = col$main, col.sub = col$sub,
xlab = xlab, ylab = ylab, zlab = zlab, scale.y = 1, angle = angle,
axis = TRUE, tick.marks = TRUE, label.tick.marks = TRUE, grid =
TRUE): partial argument match of 'cex' to 'cex.symbols'
Met.LDA : f3: no visible global function definition for 'plotFunction'
Met.LDA : f3 : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.LDA : f3 : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.LDA : f3 : by.name: no visible global function definition for
'plotFunction'
Met.LDA : f3 : by.type: no visible binding for global variable
'categoria'
Met.LDA : f3 : by.type: no visible global function definition for
'plotFunction'
Met.LDA : f3 : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.LDA : f3 : Text.size : onOK: no visible global function definition
for 'plotFunction'
Met.LDA : f3 : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.LDA : f3 : Text.size: no visible binding for global variable
'ReturnVal'
Met.LDA : f3 : CopyToClip: no visible global function definition for
'plotFunction'
Met.LDA : f3 : Angle : onOK: no visible global function definition for
'plotFunction'
Met.LDA : f3 : Angle : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.LDA : f3 : Comp: no visible binding for global variable 'ncomp'
Met.LDA : f3 : Comp : onOK: no visible global function definition for
'plotFunction'
Met.LDA : f3 : Comp : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.LDA: no visible binding for global variable 'clase'
Met.LDA: no visible binding for global variable 'categoria'
Met.LDA: no visible binding for global variable 'm.model'
Met.LDA: no visible binding for global variable 'elementos'
Met.Load.Data: no visible binding for '<<-' assignment to 'memory'
Met.Load.Data: no visible binding for global variable 'console'
Met.Load.Data: no visible binding for '<<-' assignment to 'memory.data'
Met.Load.Data: no visible binding for global variable 'memory.data'
Met.Load.Data: no visible binding for global variable 'memory'
Met.Metabolites: no visible binding for global variable 'console'
Met.Metabolites : list.spectrum: no visible binding for '<<-'
assignment to 'Index'
Met.Metabolites : list.spectrum : onOK: no visible binding for global
variable 'Index'
Met.Metabolites : list.spectrum : DeleteSelection: no visible binding
for '<<-' assignment to 'Index'
Met.Metabolites : list.spectrum : DeleteSelection: no visible binding
for global variable 'Index'
Met.Metabolites: no visible binding for '<<-' assignment to 'memory'
Met.Metabolites: no visible binding for global variable 'memory'
Met.Metabolites: no visible binding for '<<-' assignment to
'memory.data'
Met.Metabolites: no visible binding for global variable 'memory.data'
Met.NN1: no visible binding for global variable 'console'
Met.NN1 : Met.model: no visible binding for global variable 'clase'
Met.NN1 : Met.model : onOK: no visible binding for global variable
'clase'
Met.NN1 : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.NN1 : Met.model : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.NN1: no visible binding for global variable 'clase'
Met.NN1: no visible binding for global variable 'categoria'
Met.NN1: no visible binding for global variable 'm.model'
Met.NN1: no visible binding for global variable 'elementos'
Met.NN2: no visible binding for global variable 'console'
Met.NN2 : Met.text.radio : onOK: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.NN2 : Met.text.radio : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.NN2 : Met.text.radio: no visible binding for global variable
'ReturnVal'
Met.NN2 : Met.model: no visible binding for global variable 'clase'
Met.NN2 : Met.model : onOK: no visible binding for global variable
'clase'
Met.NN2 : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.NN2 : Met.model : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.NN2: no visible binding for global variable 'clase'
Met.NN2: no visible binding for global variable 'categoria'
Met.NN2: no visible binding for global variable 'm.model'
Met.NN2: no visible binding for global variable 'elementos'
Met.NN2: no visible binding for global variable 'ReturnVal'
Met.Norm: no visible binding for global variable 'console'
Met.Norm: no visible binding for '<<-' assignment to 'memory'
Met.Norm: no visible binding for global variable 'memory'
Met.Norm: no visible binding for '<<-' assignment to 'memory.data'
Met.Norm: no visible binding for global variable 'memory.data'
Met.Order: no visible binding for global variable 'console'
Met.Order: no visible binding for global variable 'categoria'
Met.Order: no visible binding for '<<-' assignment to 'ordtotal.a'
Met.Order: no visible binding for global variable 'ordtotal.a'
Met.PCA: no visible binding for global variable 'console'
Met.PCA : f2 : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.PCA : f2 : by.type: no visible binding for global variable
'categoria'
Met.PCA : f2 : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.PCA : f2 : Text.size: no visible binding for global variable
'ReturnVal'
Met.PCA : f2 : Comp : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.PCA : f2b : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.PCA : f2b : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.PCA : f2b : Text.size: no visible binding for global variable
'ReturnVal'
Met.PCA : f2b : Comp : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.PCA : f2c : by.type: no visible binding for global variable
'categoria'
Met.PCA : f2c : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.PCA : f2c : Text.size: no visible binding for global variable
'ReturnVal'
Met.PCA : f2c : Comp : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.PCA : f2c : pls.mode : onCancel: no visible binding for '<<-'
assignment to 'categoria'
Met.PLS1: no visible binding for global variable 'console'
Met.PLS1: no visible binding for global variable 'clase'
Met.PLS1 : Met.model: no visible binding for global variable 'clase'
Met.PLS1 : Met.model : onOK: no visible binding for global variable
'clase'
Met.PLS1 : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.PLS1: no visible binding for global variable 'categoria'
Met.PLS1: no visible binding for global variable 'm.model'
Met.PLS1: no visible binding for global variable 'elementos'
Met.PLS2: no visible binding for global variable 'console'
Met.PLS2 : Met.model: no visible binding for global variable 'clase'
Met.PLS2 : Met.model : onOK: no visible binding for global variable
'clase'
Met.PLS2 : Met.model : onOK: no visible binding for '<<-' assignment to
'elementos'
Met.PLS2 : f1 : Met.radio_seleccion1 : onCancel: no visible binding for
'<<-' assignment to 'categoria'
Met.PLS2 : f2: no visible binding for '<<-' assignment to
'plotFunction'
Met.PLS2 : f2: no visible global function definition for 'plotFunction'
Met.PLS2 : f2 : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.PLS2 : f2 : by.name: no visible global function definition for
'plotFunction'
Met.PLS2 : f2 : by.type: no visible binding for global variable
'categoria'
Met.PLS2 : f2 : by.type: no visible global function definition for
'plotFunction'
Met.PLS2 : f2 : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.PLS2 : f2 : Text.size : onOK: no visible global function definition
for 'plotFunction'
Met.PLS2 : f2 : CopyToClip: no visible global function definition for
'plotFunction'
Met.PLS2 : f2 : Comp : onOK: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b: no visible binding for '<<-' assignment to
'plotFunction'
Met.PLS2 : f2b: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.PLS2 : f2b : by.name: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b : by.type: no visible binding for global variable
'categoria'
Met.PLS2 : f2b : by.type: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.PLS2 : f2b : modalDialog4: no visible binding for global variable
'textEntryWidget'
Met.PLS2 : f2b : Text.size : onOK: no visible global function
definition for 'plotFunction'
Met.PLS2 : f2b : CopyToClip: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b : Comp : onOK: no visible global function definition for
'plotFunction'
Met.PLS2 : f2b : pls.mode : onOK: no visible global function definition
for 'plotFunction'
Met.PLS2 : f2b : pls.mode : onCancel: no visible binding for '<<-'
assignment to 'categoria'
Met.PLS2 : f3: no visible binding for '<<-' assignment to
'plotFunction'
Met.PLS2 : f3 : <anonymous>: warning in scatterplot3d(a[, PLSC$a], a[,
PLSC$b], a[, PLSC$d], type = "p", color = color2, pch = 10, box =
TRUE, cex.axis = size$cex.axis, cex.lab = size$cex.lab, cex.main =
size$cex.main, cex.sub = size$cex.sub, cex = size$cex, main = main,
sub = subt, xlim = NULL, ylim = NULL, zlim = NULL, col.axis =
col$axis, col.lab = col$lab, col.main = col$main, col.sub = col$sub,
xlab = xlab, ylab = ylab, zlab = zlab, scale.y = 1, angle = angle,
axis = TRUE, tick.marks = TRUE, label.tick.marks = TRUE, grid =
TRUE): partial argument match of 'cex' to 'cex.symbols'
Met.PLS2 : f3: no visible global function definition for 'plotFunction'
Met.PLS2 : f3 : change.color.bakground : onOK: no visible global
function definition for 'plotFunction'
Met.PLS2 : f3 : by.name: no visible global function definition for
'plotFunction'
Met.PLS2 : f3 : by.type: no visible binding for global variable
'categoria'
Met.PLS2 : f3 : by.type: no visible global function definition for
'plotFunction'
Met.PLS2 : f3 : modalDialog4 : onOK: no visible global function
definition for 'plotFunction'
Met.PLS2 : f3 : Text.size : onOK: no visible global function definition
for 'plotFunction'
Met.PLS2 : f3 : CopyToClip: no visible global function definition for
'plotFunction'
Met.PLS2 : f3 : Angle : onOK: no visible global function definition for
'plotFunction'
Met.PLS2 : f3 : Comp : onOK: no visible global function definition for
'plotFunction'
Met.PLS2: no visible binding for global variable 'clase'
Met.PLS2: no visible binding for global variable 'categoria'
Met.PLS2: no visible binding for global variable 'm.model'
Met.PLS2: no visible binding for global variable 'elementos'
Met.Save.Data: no visible binding for global variable 'datos'
Met.Selection: no visible binding for global variable 'console'
Met.Selection : Met.radio_seleccion2 : onOK: no visible binding for
'<<-' assignment to 'categoria2'
Met.Selection : Met.radio_seleccion2 : onOK: no visible binding for
global variable 'categoria2'
Met.Selection : Met.radio_seleccion2 : onCancel: no visible binding for
'<<-' assignment to 'categoria2'
Met.Selection: no visible binding for global variable 'categoria2'
Met.Selection: no visible binding for global variable 'categoria3'
Met.Selection: no visible binding for '<<-' assignment to 'clase'
Met.Selection: no visible binding for global variable 'clase'
Met.Selection: no visible binding for '<<-' assignment to 'memory'
Met.Selection: no visible binding for global variable 'memory'
Met.Selection: no visible binding for '<<-' assignment to 'memory.data'
Met.Selection: no visible binding for global variable 'memory.data'
Met.Show: no visible binding for global variable 'datos'
Met.delete: no visible binding for global variable 'console'
Met.delete: no visible binding for '<<-' assignment to 'memory'
Met.delete: no visible binding for global variable 'memory'
Met.delete : Met.spectrum2 : change.color.bakground : onCancel: no
visible binding for '<<-' assignment to 'ReturnVal'
Met.delete : Met.spectrum2 : change.espectrum : onCancel: no visible
binding for '<<-' assignment to 'ReturnVal'
Met.delete : Met.spectrum2 : Zoom : onCancel: no visible binding for
'<<-' assignment to 'ReturnVal'
Met.delete : Met.spectrum2 : Text.size : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.delete : Met.spectrum2 : Text.size: no visible binding for global
variable 'ReturnVal'
Met.delete : list.spectrum: no visible binding for global variable
'datos'
Met.delete : list.spectrum : onOK: no visible binding for '<<-'
assignment to 'datos'
Met.delete : list.spectrum : onOK: no visible binding for global
variable 'datos'
Met.delete: no visible binding for global variable 'datos'
Met.delete: no visible binding for '<<-' assignment to 'memory.data'
Met.delete: no visible binding for global variable 'memory.data'
Met.kopls : Met.model: no visible binding for global variable 'clase'
Met.kopls : Met.model : onOK: no visible binding for global variable
'clase'
Met.kopls : Met.model : onOK: no visible binding for '<<-' assignment
to 'elementos'
Met.kopls : Met.model : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.kopls : KOPL.MODEL : plotFunction1: no visible global function
definition for 'koplsPlotCVDiagnostics'
Met.kopls : KOPL.MODEL : plotFunction2: no visible global function
definition for 'koplsPlotSensSpec'
Met.kopls : KOPL.MODEL : onok: no visible binding for '<<-' assignment
to 'model'
Met.kopls : KOPL.MODEL : onok: no visible global function definition
for 'koplsModel'
Met.kopls : KOPL.MODEL : CV.function: no visible global function
definition for 'koplsKernel'
Met.kopls : KOPL.MODEL : CV.function: no visible global function
definition for 'koplsCV'
Met.kopls : KOPL.MODEL.2 : plotFunction3: no visible global function
definition for 'koplsPlotScores'
Met.kopls : KOPL.MODEL.2 : plotFunction3: no visible binding for global
variable 'model'
Met.kopls : KOPL.MODEL.2 : plotFunction1: no visible global function
definition for 'koplsPlotScores'
Met.kopls : KOPL.MODEL.2 : plotFunction1: no visible binding for global
variable 'model'
Met.kopls: no visible binding for global variable 'clase'
Met.kopls: no visible binding for global variable 'categoria'
Met.kopls: no visible binding for global variable 'm.model'
Met.kopls: no visible binding for global variable 'elementos'
Met.kopls: no visible global function definition for 'koplsKernel'
Met.kopls: no visible global function definition for 'koplsCV'
Met.kopls: no visible global function definition for 'koplsPredict'
Met.kopls: no visible binding for global variable 'model'
Met.model.1 : OnOK: no visible binding for '<<-' assignment to
'm.model'
Met.peak.detection: no visible binding for global variable 'console'
Met.peak.detection : Met.model : onOK: no visible binding for '<<-'
assignment to 'peak.parameters'
Met.peak.detection : Met.model : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.peak.detection: no visible binding for global variable
'peak.parameters'
Met.peak.detection: no visible binding for '<<-' assignment to 'Peaks'
Met.peak.detection: no visible binding for global variable 'Peaks'
Met.redo: no visible binding for global variable 'memory.data'
Met.redo: no visible binding for '<<-' assignment to 'datos'
Met.redo: no visible binding for global variable 'datos'
Met.spectrum: no visible binding for global variable 'console'
Met.spectrum : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.spectrum : change.espectrum : onCancel: no visible binding for
'<<-' assignment to 'ReturnVal'
Met.spectrum : Zoom : onCancel: no visible binding for '<<-' assignment
to 'ReturnVal'
Met.spectrum : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.spectrum : Text.size: no visible binding for global variable
'ReturnVal'
Met.spectrum.2: no visible binding for global variable 'console'
Met.spectrum.2: no visible binding for global variable 'C.Shift'
Met.spectrum.2 : Met.reference: no visible binding for global variable
'xPlotCoord'
Met.spectrum.2 : OnLeftClick: no visible binding for '<<-' assignment
to 'xPlotCoord'
Met.spectrum.2 : change.color.bakground : onCancel: no visible binding
for '<<-' assignment to 'ReturnVal'
Met.spectrum.2 : Zoom : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.spectrum.2 : Text.size : onCancel: no visible binding for '<<-'
assignment to 'ReturnVal'
Met.spectrum.2 : Text.size: no visible binding for global variable
'ReturnVal'
Met.spectrum.2 : onok: no visible binding for '<<-' assignment to
'C.Shift'
Met.spectrum.2 : c.spectrum: no visible global function definition for
'change.espectrum'
Met.spectrum.2 : superimpose: no visible global function definition for
'change.espectrum'
Met.undo: no visible binding for global variable 'memory'
Met.undo: no visible binding for '<<-' assignment to 'memory'
Met.undo: no visible binding for '<<-' assignment to 'datos'
Met.undo: no visible binding for global variable 'memory.data'
Met.undo: no visible binding for global variable 'datos'
Metabonomic: no visible binding for global variable 'verbose'
Metabonomic: no visible binding for '<<-' assignment to 'memory.data'
Metabonomic : .exit: no visible binding for global variable 'console'
Metabonomic : Met.stop: no visible binding for global variable
'console'
Metabonomic: no visible binding for '<<-' assignment to 'console'
Metabonomic: no visible binding for global variable 'console'
Metabonomic : <anonymous>: no visible binding for global variable
'datos'
Metabonomic : <anonymous>: no visible binding for global variable
'externa'
Metabonomic : <anonymous>: no visible binding for global variable
'Peaks'
Metabonomic : <anonymous>: no visible binding for global variable
'memory.data'
Phase.correction : Met.FID : Zoom : onCancel: no visible binding for
'<<-' assignment to 'ReturnVal'
Phase.correction : Met.FID : Met.reference: no visible binding for
global variable 'xPlotCoord'
Phase.correction : Met.FID : OnLeftClick: no visible binding for '<<-'
assignment to 'xPlotCoord'
Phase.correction : Met.FID : Pivot : onCancel: no visible binding for
'<<-' assignment to 'ReturnVal'
Phase.correction : Met.FID : onok: no visible binding for '<<-'
assignment to 'spect.fid'
Phase.correction: no visible binding for global variable 'file.out'
Phase.correction: no visible binding for global variable 'spect.fid'
Phase.correction: no visible binding for '<<-' assignment to
'memory.data'
Phase.correction: no visible binding for global variable 'memory.data'
Phase.correction: no visible binding for global variable 'memory'
Try: no visible binding for global variable 'console'
manual.model: no visible binding for global variable 'datos'
manual.model: no visible binding for '<<-' assignment to 'Index'
manual.model : onOK: no visible binding for '<<-' assignment to 'samp'
manual.model : onOK: no visible binding for global variable 'Index'
manual.model : DeleteSelection: no visible binding for '<<-' assignment
to 'Index'
manual.model : DeleteSelection: no visible binding for global variable
'Index'
manual.model : DeleteSelection: no visible binding for global variable
'datos'
msc.peaks.align: no visible global function definition for
'msc.peaks.read.csv'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... NONE
- checking PDF version of manual ... OK
NOTE: There were 4 notes.
See
'd:/Rcompile/CRANpkg/local/2.15/Metabonomic.Rcheck/00check.log'
for details.