- using R Under development (unstable) (2012-02-24 r58481)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'LifeTables/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'LifeTables' version '0.1'
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
- checking whether package 'LifeTables' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
create.help.button : <anonymous>: warning in ghelp(topic = topic,
package = package, cont = gwindow(parent = parent.window, width =
700, height = 700)): partial argument match of 'cont' to 'container'
create.help.button: warning in gbutton(action = helpaction, cont =
parent.group): partial argument match of 'cont' to 'container'
create.plot.window: warning in ggroup(cont = win, horizontal = FALSE,
expand = TRUE): partial argument match of 'cont' to 'container'
create.plot.window: warning in ggroup(cont = g, horizontal = TRUE):
partial argument match of 'cont' to 'container'
create.plot.window: warning in glabel("Output type:", cont = g1):
partial argument match of 'cont' to 'container'
create.plot.window: warning in gdroplist(c("pdf", "postscript", "png",
"jpeg", "tiff", "bmp"), cont = g1): partial argument match of 'cont'
to 'container'
create.plot.window: warning in gbutton("Save", cont = g1): partial
argument match of 'cont' to 'container'
create.plot.window: warning in ggroup(cont = g, horizontal = TRUE,
expand = TRUE): partial argument match of 'cont' to 'container'
create.plot.window: warning in ggraphics(cont = g2, ps = ps, dpi = dpi,
...): partial argument match of 'cont' to 'container'
generateLT: warning in ggroup(horizontal = FALSE, cont = win): partial
argument match of 'cont' to 'container'
generateLT: warning in ggroup(horizontal = TRUE, cont = g): partial
argument match of 'cont' to 'container'
generateLT: warning in glabel("e0:", cont = par.g): partial argument
match of 'cont' to 'container'
generateLT: warning in gedit(width = 10, cont = par.g): partial
argument match of 'cont' to 'container'
generateLT: warning in glabel("alpha:", cont = par.g): partial argument
match of 'cont' to 'container'
generateLT: warning in gedit(0, width = 10, cont = par.g): partial
argument match of 'cont' to 'container'
generateLT: warning in glabel(" Changing values of e0 or alpha will
update the life table.", cont = par.g): partial argument match of
'cont' to 'container'
generateLT: warning in gtable(life.table$lt, cont = g, expand = TRUE):
partial argument match of 'cont' to 'container'
generateLT: warning in gbutton("Cancel", handler = function(h, ...)
dispose(win), cont = button.g): partial argument match of 'cont' to
'container'
generateLT: warning in gdroplist(plot.colnames, selected =
which(plot.colnames == plot.defaults$lt.col), cont = button.g):
partial argument match of 'cont' to 'container'
generateLT: warning in gcheckbox("Log scale", checked =
plot.defaults$log, cont = button.g, anchor = c(-1, 0)): partial
argument match of 'cont' to 'container'
generateLT: warning in gbutton(action = gaction(label = " Plot ", icon
= "newplot", handler = plotLTcolumn, action = list(mw = win, env =
e)), cont = button.g): partial argument match of 'cont' to
'container'
generateLT: warning in gbutton(action = gaction(label = " Export ",
icon = "save", handler = exportLT, action = list(mw = win, env = e)),
cont = button.g): partial argument match of 'cont' to 'container'
hmd.DA: no visible binding for global variable 'hmd.1m0.train.m'
hmd.DA: no visible binding for global variable 'hmd.5m0.train.m'
hmd.DA: no visible binding for global variable 'hmd.1q0.train.m'
hmd.DA: no visible binding for global variable 'hmd.5q0.train.m'
hmd.DA: no visible binding for global variable 'hmd.1m0a.train.m'
hmd.DA: no visible binding for global variable 'hmd.5m0a.train.m'
hmd.DA: no visible binding for global variable 'hmd.1q0a.train.m'
hmd.DA: no visible binding for global variable 'hmd.5q0a.train.m'
hmd.DA: no visible binding for global variable 'hmd.1m0.train.f'
hmd.DA: no visible binding for global variable 'hmd.5m0.train.f'
hmd.DA: no visible binding for global variable 'hmd.1q0.train.f'
hmd.DA: no visible binding for global variable 'hmd.5q0.train.f'
hmd.DA: no visible binding for global variable 'hmd.1m0a.train.f'
hmd.DA: no visible binding for global variable 'hmd.5m0a.train.f'
hmd.DA: no visible binding for global variable 'hmd.1q0a.train.f'
hmd.DA: no visible binding for global variable 'hmd.5q0a.train.f'
hmd.DA.mx: no visible binding for global variable 'mlt.mx'
hmd.DA.mx: no visible binding for global variable 'flt.mx'
hmd.DA.mx: no visible binding for global variable 'class5'
modelLT.gui: warning in ggroup(horizontal = FALSE, cont = main.win):
partial argument match of 'cont' to 'container'
modelLT.gui: warning in gframe("<span color='blue'>Life Table
Settings</span>", markup = TRUE, horizontal = FALSE, cont = main.g):
partial argument match of 'cont' to 'container'
modelLT.gui: warning in glayout(cont = family.f): partial argument
match of 'cont' to 'container'
modelLT.gui: warning in glabel("Indicator:", cont = indicator.g):
partial argument match of 'cont' to 'container'
modelLT.gui: warning in gdroplist(indicators, cont = indicator.g,
selected = defaults$child.mort): partial argument match of 'cont' to
'container'
modelLT.gui: warning in glabel(" ", cont = indicator.g): partial
argument match of 'cont' to 'container'
modelLT.gui: warning in gedit(width = 10, cont = indicator.g): partial
argument match of 'cont' to 'container'
modelLT.gui: warning in glabel("Add adult mortality:", cont =
indicator.g): partial argument match of 'cont' to 'container'
modelLT.gui: warning in gcheckbox("45q15", checked =
!is.null(defaults$adult.mort), cont = indicator.g, handler =
function(h, ...) {: partial argument match of 'cont' to 'container'
modelLT.gui: warning in enabled(e$admort.value) <- svalue(h$obj):
partial argument match of 'cont' to 'container'
modelLT.gui: warning in }): partial argument match of 'cont' to
'container'
modelLT.gui: warning in gedit(if (is.null(defaults$adult.mort)) "" else
defaults$adult.mort, width = 10, cont = indicator.g): partial
argument match of 'cont' to 'container'
modelLT.gui: warning in glabel("Sex:", cont = indicator.g): partial
argument match of 'cont' to 'container'
modelLT.gui: warning in gdroplist(sex.values, cont = indicator.g,
selected = which(sex.values == defaults$sex)): partial argument match
of 'cont' to 'container'
modelLT.gui: warning in ggroup(horizontal = TRUE, cont = main.g):
partial argument match of 'cont' to 'container'
modelLT.gui: warning in gbutton("Quit", handler = quit.modelLT, cont =
button.g): partial argument match of 'cont' to 'container'
modelLT.gui: warning in gbutton(action = gaction(label = " Generate
Life Table ", icon = "dataframe", handler = generateLT, action =
list(mw = main.win, env = e)), cont = button.g): partial argument
match of 'cont' to 'container'
mortmod: no visible binding for global variable 'lo.devs'
mortmod: no visible binding for global variable 'averages.smooth'
mortmod: no visible binding for global variable 'hi.devs'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
MLTobs.RData 611Kb 412Kb xz
- checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
'd:/Rcompile/CRANpkg/local/2.15/LifeTables.Rcheck/00check.log'
for details.