• using R Under development (unstable) (2012-02-27 r58511)
  • using platform: x86_64-pc-mingw32 (64-bit)
  • using session charset: ISO8859-1
  • checking for file 'IgorR/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'IgorR' version '0.5'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking whether package 'IgorR' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • loading checks for arch 'x64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    .ReadUserStr: warning in .readCharsWithEnc(con, strLen, enc =
    ifelse(IgorPlatform == "windows", "WINDOWS-1252", "macintosh")):
    partial argument match of 'enc' to 'encoding'
    ReadAllNclampLogTables: warning in dir(logfiledir, full = T): partial
    argument match of 'full' to 'full.names'
    ReadAllNclampLogTables: warning in assign("logfiles", list(), env =
    .GlobalEnv): partial argument match of 'env' to 'envir'
    ReadAllNclampLogTables: no visible binding for '<<-' assignment to
    'logfiles'
    ReadAllNclampLogTables: no visible binding for global variable
    'logfiles'
    SummariseSweepFile: warning in grep("^Chan[A-Z]$", listnames, val = T):
    partial argument match of 'val' to 'value'
    UpdateSweepDataFrame: warning in dir(folder, patt = "_[0-9]+\\.pxp$",
    full = T): partial argument match of 'patt' to 'pattern'
    UpdateSweepDataFrame: warning in dir(folder, patt = "_[0-9]+\\.pxp$",
    full = T): partial argument match of 'full' to 'full.names'
    read.pxp: warning in match.arg(IgorPlatform, choice = c("windows",
    "macintosh")): partial argument match of 'choice' to 'choices'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ...
    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'x64' ... OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ...
    ** running tests for arch 'i386' OK
    Running 'test-all.R'
    ** running tests for arch 'x64' OK
    Running 'test-all.R'
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    'd:/Rcompile/CRANpkg/local/2.15/IgorR.Rcheck/00check.log'
    for details.