- using R version 2.13.0 alpha (2011-03-28 r55141)
- using platform: i386-apple-darwin9.8.0 (32-bit)
- using session charset: ASCII
- checking for file 'survey/DESCRIPTION' ... OK
- this is package 'survey' version '3.23-3'
- checking package name space information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking for executable files ... OK
- checking whether package 'survey' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the name space can be loaded with stated dependencies ... OK
- checking whether the name space can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
svyplot.default: no visible global function definition for 'hcell'
- checking Rd files ... NOTE
prepare_Rd: SE.Rd:25-27: Dropping empty section \examples
prepare_Rd: as.fpc.Rd:33-35: Dropping empty section \examples
prepare_Rd: as.svydesign2.Rd:31-33: Dropping empty section \examples
prepare_Rd: bootweights.Rd:51-53: Dropping empty section \examples
prepare_Rd: dimnames.DBIsvydesign.Rd:44-45: Dropping empty section \examples
prepare_Rd: marginpred.Rd:41-43: Dropping empty section \references
prepare_Rd: svrVar.Rd:26-28: Dropping empty section \examples
prepare_Rd: svyCprod.Rd:99-100: Dropping empty section \examples
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... NOTE
'::' or ':::' import not declared from: foreign
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking sizes of PDF files under inst/doc ... NOTE
'qpdf' made some significant size reductions:
compacted 'pps.pdf' from 260Kb to 159Kb
consider running tools::compactPDF() on these files
- checking examples ... OK
- checking for unstated dependencies in tests ... OK
- checking tests ... OK
Running 'DBIcheck.R'
Comparing 'DBIcheck.Rout' to 'DBIcheck.Rout.save' ...8c8,9
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running 'api.R'
Comparing 'api.Rout' to 'api.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running 'bycovmat.R'
Running 'caleg.R'
Comparing 'caleg.Rout' to 'caleg.Rout.save' ...13c13,14
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
39c40
< api99 654.49 29.82
---
> api99 654.49 29.820
116c117
< enroll 3811472 0
---
> enroll 3811472 3.226e-10
186c187
< (Dispersion parameter for quasibinomial family taken to be 1.919987)
---
> (Dispersion parameter for quasibinomial family taken to be 1.919938)
Running 'check.R'
Comparing 'check.Rout' to 'check.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running 'deff.R'
Comparing 'deff.Rout' to 'deff.Rout.save' ...5,11d4
<
< Attaching package: 'survey'
<
< The following object(s) are masked from 'package:graphics':
<
< dotchart
<
Running 'domain.R'
Comparing 'domain.Rout' to 'domain.Rout.save' ...15c15,16
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
138d138
< The following object(s) are masked from 'package:base':
140c140,147
< det
---
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
Running 'fpc.R'
Comparing 'fpc.Rout' to 'fpc.Rout.save' ...4,10d3
<
< Attaching package: 'survey'
<
< The following object(s) are masked from 'package:graphics':
<
< dotchart
<
Running 'kalton.R'
Comparing 'kalton.Rout' to 'kalton.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
Running 'lonely.psu.R'
Comparing 'lonely.psu.Rout' to 'lonely.psu.Rout.save' ...9c9,10
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
38c39
< Error in onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], :
---
> Error in switch(lonely.psu, certainty = crossprod(x * sqrt(scale)), remove = crossprod(x * :
Running 'multistage.R'
Comparing 'multistage.Rout' to 'multistage.Rout.save' ...10c10,11
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
Running 'nwts-cch.R'
Comparing 'nwts-cch.Rout' to 'nwts-cch.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
25d25
< The following object(s) are masked from 'package:base':
27c27,34
< det
---
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
47c54
< Likelihood ratio test= on 5 df, p= n= 1062, number of events= 571
---
> Likelihood ratio test= on 5 df, p= n= 1062
73c80
< Likelihood ratio test= on 5 df, p= n= 1062, number of events= 571
---
> Likelihood ratio test= on 5 df, p= n= 1062
Running 'nwts.R'
Comparing 'nwts.Rout' to 'nwts.Rout.save' ... OK
Running 'pps.R'
Comparing 'pps.Rout' to 'pps.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
52d52
< The following object(s) are masked from 'package:base':
54c54,61
< det
---
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
Running 'quantile.R'
Comparing 'quantile.Rout' to 'quantile.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
37c38
< y 0.02352941 0.2230769 0.9340909 3.55 9.4
---
> y 0.02352941 0.2230769 0.934091 3.55 9.4
Running 'rakecheck.R'
Comparing 'rakecheck.Rout' to 'rakecheck.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
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>
> The following object(s) are masked from package:graphics :
Running 'raowuboot.R'
Running 'regpredict.R'
Comparing 'regpredict.Rout' to 'regpredict.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running 'scoping.R'
Running 'survcurve.R'
Comparing 'survcurve.Rout' to 'survcurve.Rout.save' ... OK
Running 'twophase.R'
Comparing 'twophase.Rout' to 'twophase.Rout.save' ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
20d20
< The following object(s) are masked from 'package:base':
22c22,29
< det
---
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
128c135,136
< The following object(s) are masked _by_ '.GlobalEnv':
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>
> The following object(s) are masked _by_ .GlobalEnv :
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking running R code from vignettes ... OK
- checking re-building of vignettes ... OK
- checking PDF version of manual ... OK
- elapsed time (check, wall clock): 3:18