• using R version 2.13.0 Under development (unstable) (2011-03-07 r54691)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'BiodiversityR/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'BiodiversityR' version '1.5'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'BiodiversityR' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  import.from.Access: no visible global function definition for
  'odbcConnectAccess'
  import.from.Excel: no visible global function definition for
  'odbcConnectExcel'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... ERROR
  Running examples in 'BiodiversityR-Ex.R' failed
  The error most likely occurred in:
  
  > ### Name: multiconstrained
  > ### Title: Pairwise Comparisons for All Levels of a Categorical Variable by
  > ### RDA, CCA or Capscale
  > ### Aliases: multiconstrained
  > ### Keywords: multivariate
  >
  > ### ** Examples
  >
  > library(vegan)
  > library(MASS)
  > data(dune)
  > data(dune.env)
  > multiconstrained(method="capscale", dune~Management, data=dune.env,
  + distance="bray",add=TRUE)
  Warning in cmdscale(X, k = k, eig = TRUE, add = add) :
  only 6 of the first 7 eigenvalues are > 0
  Error in capscale(formula1, data = newenvdata, distance = distance, add = add) :
  (subscript) logical subscript too long
  Calls: multiconstrained -> capscale
  Execution halted
• elapsed time (check, wall clock): 0:34