Check results for 'survey'

using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/survey.Rcheck'
using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
using session charset: UTF-8
checking for file 'survey/DESCRIPTION' ... OK
this is package 'survey' version '3.19'
checking package name space information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking for executable files ... OK
checking whether package 'survey' can be installed ... OK
checking package directory ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the name space can be loaded with stated dependencies ... OK
checking whether the name space can be unloaded cleanly ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... NOTE
svyolr.survey.design2: no visible binding for global variable ‘pgumbel’
svyolr.survey.design2: no visible binding for global variable ‘dgumbel’
svyplot.default: no visible global function definition for ‘hcell’
checking Rd files ... NOTE
prepare_Rd: SE.Rd:25-27: Dropping empty section \examples
prepare_Rd: as.fpc.Rd:33-35: Dropping empty section \examples
prepare_Rd: as.svydesign2.Rd:31-33: Dropping empty section \examples
prepare_Rd: bootweights.Rd:51-53: Dropping empty section \examples
prepare_Rd: dimnames.DBIsvydesign.Rd:44-45: Dropping empty section \examples
prepare_Rd: marginpred.Rd:41-43: Dropping empty section \references
prepare_Rd: svrVar.Rd:26-28: Dropping empty section \examples
prepare_Rd: svyCprod.Rd:99-100: Dropping empty section \examples
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking data for non-ASCII characters ... OK
checking examples ... OK
checking tests ...
Running ‘DBIcheck.R’
Comparing ‘DBIcheck.Rout’ to ‘DBIcheck.Rout.save’ ...8c8,9
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘api.R’
Comparing ‘api.Rout’ to ‘api.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘bycovmat.R’
Running ‘caleg.R’
Comparing ‘caleg.Rout’ to ‘caleg.Rout.save’ ...13c13,14
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
116c117
< enroll 3811472 3.003e-10
---
> enroll 3811472 3.226e-10
Running ‘check.R’
Comparing ‘check.Rout’ to ‘check.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘deff.R’
Comparing ‘deff.Rout’ to ‘deff.Rout.save’ ...5,11d4
<
< Attaching package: 'survey'
<
< The following object(s) are masked from 'package:graphics':
<
< dotchart
<
Running ‘domain.R’
Comparing ‘domain.Rout’ to ‘domain.Rout.save’ ...15c15,16
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
134a136,148
>
> Attaching package: 'Matrix'
>
>
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
>
Running ‘fpc.R’
Comparing ‘fpc.Rout’ to ‘fpc.Rout.save’ ...4,10d3
<
< Attaching package: 'survey'
<
< The following object(s) are masked from 'package:graphics':
<
< dotchart
<
Running ‘kalton.R’
Comparing ‘kalton.Rout’ to ‘kalton.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘lonely.psu.R’
Comparing ‘lonely.psu.Rout’ to ‘lonely.psu.Rout.save’ ...9c9,10
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘multistage.R’
Comparing ‘multistage.Rout’ to ‘multistage.Rout.save’ ...10c10,11
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘nwts-cch.R’
Comparing ‘nwts-cch.Rout’ to ‘nwts-cch.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
21a23,35
>
> Attaching package: 'Matrix'
>
>
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
>
Running ‘nwts.R’
Comparing ‘nwts.Rout’ to ‘nwts.Rout.save’ ...10c10,11
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
32a34,46
>
> Attaching package: 'Matrix'
>
>
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
>
Running ‘pps.R’
Comparing ‘pps.Rout’ to ‘pps.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
48a50,62
>
> Attaching package: 'Matrix'
>
>
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
>
Running ‘quantile.R’
Comparing ‘quantile.Rout’ to ‘quantile.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘rakecheck.R’
Comparing ‘rakecheck.Rout’ to ‘rakecheck.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘regpredict.R’
Comparing ‘regpredict.Rout’ to ‘regpredict.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘scoping.R’
Running ‘survcurve.R’
Comparing ‘survcurve.Rout’ to ‘survcurve.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
Running ‘twophase.R’
Comparing ‘twophase.Rout’ to ‘twophase.Rout.save’ ...7c7,8
< The following object(s) are masked from 'package:graphics':
---
>
> The following object(s) are masked from package:graphics :
16a18,30
>
> Attaching package: 'Matrix'
>
>
> The following object(s) are masked from package:stats :
>
> xtabs
>
>
> The following object(s) are masked from package:base :
>
> rcond
>
121c135,136
< The following object(s) are masked _by_ '.GlobalEnv':
---
>
> The following object(s) are masked _by_ .GlobalEnv :
OK
checking package vignettes in 'inst/doc' ... OK
checking PDF version of manual ... OK

Time 5:24.04, 201.33 + 10.95