* install options are ' --no-html' * installing *source* package ‘smoothSurv’ ... ** libs make[1]: Entering directory `/data/gannet/tmp/ripley/R/packages/tests-Sun/smoothSurv/src' sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c AKmatrix.cpp -o AKmatrix.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c Scythe_IDE.cpp -o Scythe_IDE.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c Scythe_LA.cpp -o Scythe_LA.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c Scythe_Math.cpp -o Scythe_Math.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c Scythe_Matrix.cpp -o Scythe_Matrix.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c Scythe_Stat.cpp -o Scythe_Stat.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c convertCAD.cpp -o convertCAD.o "Scythe_Matrix_Iterator.h", line 574: Error: Cannot use SCYTHE::const_row_major_iterator<double> to initialize SCYTHE::row_major_iterator<double>. "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 65: Where: While instantiating "SCYTHE::const_row_major_iterator<double>::operator++(int)". "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 65: Where: Instantiated from std::accumulate<SCYTHE::const_row_major_iterator<double>, double>(SCYTHE::const_row_major_iterator<double>, SCYTHE::const_row_major_iterator<double>, double). "Scythe_Stat.cpp", line 63: Where: Instantiated from SCYTHE::sum<double>(const SCYTHE::Matrix<double>&). "convertCAD.cpp", line 53: Where: Instantiated from non-template code. 1 Error(s) detected. make[1]: *** [convertCAD.o] Error 1 sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c createPosDef.cpp -o createPosDef.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c difference.cpp -o difference.o "Scythe_Matrix_Iterator.h", line 1061: Error: Cannot use SCYTHE::const_col_major_iterator<double> to initialize SCYTHE::col_major_iterator<double>. "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 81: Where: While instantiating "SCYTHE::const_col_major_iterator<double>::operator++(int)". "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 81: Where: Instantiated from std::inner_product<double*, SCYTHE::const_col_major_iterator<double>, double>(double*, double*, SCYTHE::const_col_major_iterator<double>, double). "Scythe_Matrix.cpp", line 506: Where: Instantiated from SCYTHE::Matrix<double>::operator*=(const SCYTHE::Matrix<double>&). "Scythe_Matrix.cpp", line 1433: Where: Instantiated from SCYTHE::operator*<double>(SCYTHE::Matrix<double>, const SCYTHE::Matrix<double>&). "difference.cpp", line 66: Where: Instantiated from non-template code. 1 Error(s) detected. make[1]: *** [difference.o] Error 1 sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c eispackFORT.cpp -o eispackFORT.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c gauss.cpp -o gauss.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c linpackFORT.cpp -o linpackFORT.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c penalLogLik.cpp -o penalLogLik.o sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c smoothSurvReg84.cpp -o smoothSurvReg84.o "Scythe_Matrix_Iterator.h", line 1061: Error: Cannot use SCYTHE::const_col_major_iterator<double> to initialize SCYTHE::col_major_iterator<double>. "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 81: Where: While instantiating "SCYTHE::const_col_major_iterator<double>::operator++(int)". "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 81: Where: Instantiated from std::inner_product<double*, SCYTHE::const_col_major_iterator<double>, double>(double*, double*, SCYTHE::const_col_major_iterator<double>, double). "Scythe_Matrix.cpp", line 506: Where: Instantiated from SCYTHE::Matrix<double>::operator*=(const SCYTHE::Matrix<double>&). "penalLogLik.cpp", line 345: Where: Instantiated from non-template code. 1 Error(s) detected. make[1]: *** [penalLogLik.o] Error 1 sunCC -I/data/gannet/ripley/R/R-SunStudio/include -I/opt/local/include -Kpic -xO5 -xlibmil -nofstore -features=tmplrefstatic -c solve.QP.compact.cpp -o solve.QP.compact.o "Scythe_Matrix_Iterator.h", line 574: Error: Cannot use SCYTHE::const_row_major_iterator<double> to initialize SCYTHE::row_major_iterator<double>. "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 65: Where: While instantiating "SCYTHE::const_row_major_iterator<double>::operator++(int)". "/opt/sunstudio12.1/prod/include/CC/Cstd/numeric", line 65: Where: Instantiated from std::accumulate<SCYTHE::const_row_major_iterator<double>, double>(SCYTHE::const_row_major_iterator<double>, SCYTHE::const_row_major_iterator<double>, double). "Scythe_Stat.cpp", line 63: Where: Instantiated from SCYTHE::sum<double>(const SCYTHE::Matrix<double>&). "smoothSurvReg84.h", line 64: Where: Instantiated from non-template code. 1 Error(s) detected. make[1]: *** [smoothSurvReg84.o] Error 1 make[1]: Target `all' not remade because of errors. make[1]: Leaving directory `/data/gannet/tmp/ripley/R/packages/tests-Sun/smoothSurv/src' ERROR: compilation failed for package ‘smoothSurv’ * removing ‘/data/gannet/tmp/ripley/R/packages/tests-Sun/smoothSurv.Rcheck/smoothSurv’