• using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/ggplot2.Rcheck'
• using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
• using session charset: UTF-8
• checking for file 'ggplot2/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'ggplot2' version '0.8.5'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'ggplot2' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  borders: no visible binding for global variable ‘long’
  borders: no visible binding for global variable ‘lat’
  borders: no visible binding for global variable ‘group’
  collide: no visible binding for global variable ‘x’
  compute_intercept: no visible binding for global variable ‘group’
  ggfluctuation: no visible binding for global variable ‘x’
  ggfluctuation: no visible binding for global variable ‘y’
  ggfluctuation: no visible binding for global variable ‘result’
  ggfluctuation: no visible binding for global variable ‘freq’
  html_auto_link: no visible binding for global variable ‘links’
  label_bquote: no visible binding for global variable ‘x’
  limits.POSIXct: no visible binding for global variable ‘ScaleDateTime’
  limits.POSIXlt: no visible binding for global variable ‘ScaleDateTime’
  plotmatrix: no visible binding for global variable ‘x’
  plotmatrix: no visible binding for global variable ‘y’
  plotmatrix: no visible binding for global variable ‘..scaled..’
  rdoc_auto_link: no visible binding for global variable ‘links’
  summarise_by_x: no visible binding for global variable ‘group’
  summarise_by_x: no visible binding for global variable ‘x’
• checking Rd files ... NOTE
  prepare_Rd: stat_abline.rd:21-23: Dropping empty section \examples
  prepare_Rd: stat_hline.rd:22-24: Dropping empty section \examples
  prepare_Rd: stat_vline.rd:22-24: Dropping empty section \examples
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... WARNING
  Argument items with no description in Rd object 'absoluteGrob':
  grob width height xmin ymin
  
  Argument items with no description in Rd object 'add_missing_levels':
  dfs levels
  
  Argument items with no description in Rd object 'aes_to_scale':
  var
  
  Argument items with no description in Rd object 'annotate':
  geom x y xmin xmax ymin ymax ...
  
  Argument items with no description in Rd object 'breaks':
  x equal nbins binwidth
  
  Argument items with no description in Rd object 'compute_intercept':
  data intercept var
  
  Argument items with no description in Rd object 'discrete_range':
  ... drop
  
  Argument items with no description in Rd object 'expand_limits':
  ...
  
  Argument items with no description in Rd object 'expand_range':
  zero
  
  Argument items with no description in Rd object 'nulldefault-infix':
  a b
  
  Argument items with no description in Rd object 'fortify.SpatialPolygonsDataFrame':
  model data region ...
  
  Argument items with no description in Rd object 'fortify':
  model data ...
  
  Argument items with no description in Rd object 'fortify.lm':
  model data ...
  
  Argument items with no description in Rd object 'fullseq_date':
  time
  
  Argument items with no description in Rd object 'geditGrob':
  ... grep global
  
  Argument items with no description in Rd object 'ggfluctuation':
  ceiling
  
  Argument items with no description in Rd object 'ggplot_build':
  plot
  
  Argument items with no description in Rd object 'ggplot.data.frame':
  ... environment
  
  Argument items with no description in Rd object 'ggplot':
  data ...
  
  Argument items with no description in Rd object 'ggplotGrob':
  keep ...
  
  Argument items with no description in Rd object 'ggsave':
  drop ...
  
  Argument items with no description in Rd object 'hexGrob':
  size colour fill
  
  Argument items with no description in Rd object '"%inside%"':
  x interval
  
  Argument items with no description in Rd object 'is_calculated_aes':
  aesthetics
  
  Argument items with no description in Rd object 'is.constant':
  x
  
  Argument items with no description in Rd object 'label_both':
  variable value
  
  Argument items with no description in Rd object 'label_bquote':
  expr
  
  Argument items with no description in Rd object 'label_parsed':
  variable value
  
  Argument items with no description in Rd object 'label_value':
  variable value
  
  Argument items with no description in Rd object 'opts':
  ...
  
  Argument items with no description in Rd object 'parse_unit_spec':
  unitspec
  
  Argument items with no description in Rd object 'plot_theme':
  x
  
  Argument items with no description in Rd object 'plotmatrix':
  colour
  
  Argument items with no description in Rd object 'pos_dodge':
  df width
  
  Argument items with no description in Rd object 'pos_fill':
  df width
  
  Argument items with no description in Rd object 'pos_stack':
  df width
  
  Argument items with no description in Rd object 'predictdf':
  model xseq se level
  
  Argument items with no description in Rd object 'print.theme':
  x ...
  
  Argument items with no description in Rd object 'rect_to_poly':
  xmin xmax ymin ymax
  
  Argument items with no description in Rd object 'rename_aes':
  x
  
  Argument items with no description in Rd object 'rescale':
  x to from clip
  
  Argument items with no description in Rd object 'stairstep':
  data direction
  
  Argument items with no description in Rd object 'strip_dots':
  aesthetics
  
  Argument items with no description in Rd object 'surround_viewports':
  position widths heights legend_vp
  
  Argument items with no description in Rd object 'theme_bw':
  base_size
  
  Argument items with no description in Rd object 'theme_gray':
  base_size
  
  Argument items with no description in Rd object 'theme_render':
  theme element ... name
  
  Argument items with no description in Rd object 'theme_update':
  ...
  
  Argument items with no description in Rd object 'transform_position':
  df trans_x trans_y ...
  
  Argument items with no description in Rd object 'trim_infinite':
  x range
  
  Argument items with no description in Rd object 'ulevels':
  x
  
  Argument items with no description in Rd object 'update_geom_defaults':
  geom new
  
  Argument items with no description in Rd object 'update_labels':
  labels
  
  Argument items with no description in Rd object 'update_stat_defaults':
  geom new
  
  Argument items with no description in Rd object 'xlim':
  ...
  
  Argument items with no description in Rd object 'ylim':
  ...
  
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
  
  WARNING: There was 1 warning, see
  /data/gannet/tmp/ripley/R/packages/tests-Sun/ggplot2.Rcheck/00check.log
  for details
  
  Time 5:42.63, 226.02 + 6.98