• using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/cba.Rcheck'
• using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
• using session charset: UTF-8
• checking for file 'cba/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'cba' version '0.2-6'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'cba' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... ERROR
  Running examples in 'cba-Ex.R' failed.
  The error most likely occurred in:
  
  > ### * proximus
  >
  > flush(stderr()); flush(stdout())
  >
  > ### Name: proximus
  > ### Title: Proximus
  > ### Aliases: proximus
  > ### Keywords: cluster
  >
  > ### ** Examples
  >
  > x <- matrix(sample(c(FALSE, TRUE), 200, rep=TRUE), ncol=10)
  > pr <- proximus(x, max.radius=8)
  Warning in proximus(x, max.radius = 8) : res2R result count error
  > summary(pr)
  Error in if (a$c == 0 && ny == 0) 1 else 1/(1 + 2 * (a$n - a$c)/(a$c + :
  missing value where TRUE/FALSE needed
  Calls: summary -> summary.proximus
  Execution halted
  Time 1:35.90, 60.90 + 4.81