• using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/MLEcens.Rcheck'
• using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
• using session charset: UTF-8
• checking for file 'MLEcens/DESCRIPTION' ... OK
• this is package 'MLEcens' version '0.1-2'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'MLEcens' can be installed ... WARNING
  Found the following significant warnings:
  Warning: ./man/canon2real.rd:26: unknown macro '\item'
  Warning: ./man/canon2real.rd:29: unknown macro '\item'
  Warning: ./man/canon2real.rd:31: unknown macro '\item'
  Warning: ./man/computeMLE.rd:23: unknown macro '\item'
  Warning: ./man/computeMLE.rd:26: unknown macro '\item'
  Warning: ./man/computeMLE.rd:29: unknown macro '\item'
  Warning: ./man/menopause.rd:44: unknown macro '\bf'
  Warning: ./man/menopauseMod.rd:54: unknown macro '\bf'
  Warning: ./man/real2canon.rd:7: unknown macro '\item'
  Warning: ./man/real2canon.rd:9: unknown macro '\item'
  Warning: ./man/real2canon.rd:10: unknown macro '\item'
  Warning: ./man/real2canon.rd:26: unknown macro '\item'
  Warning: ./man/real2canon.rd:29: unknown macro '\item'
  Warning: ./man/real2canon.rd:31: unknown macro '\item'
  Warning: ./man/real2canon.rd:57: unexpected '}'
  Warning: ./man/reduc.rd:24: unknown macro '\item'
  Warning: ./man/reduc.rd:27: unknown macro '\item'
  Warning: ./man/reduc.rd:30: unknown macro '\item'
  See http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-sun/MLEcens-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... WARNING
  prepare_Rd: canon2real.rd:26: unknown macro '\item'
  prepare_Rd: canon2real.rd:29: unknown macro '\item'
  prepare_Rd: canon2real.rd:31: unknown macro '\item'
  prepare_Rd: computeMLE.rd:23: unknown macro '\item'
  prepare_Rd: computeMLE.rd:26: unknown macro '\item'
  prepare_Rd: computeMLE.rd:29: unknown macro '\item'
  prepare_Rd: menopause.rd:44: unknown macro '\bf'
  prepare_Rd: menopauseMod.rd:54: unknown macro '\bf'
  prepare_Rd: real2canon.rd:7: unknown macro '\item'
  prepare_Rd: real2canon.rd:9: unknown macro '\item'
  prepare_Rd: real2canon.rd:10: unknown macro '\item'
  prepare_Rd: real2canon.rd:26: unknown macro '\item'
  prepare_Rd: real2canon.rd:29: unknown macro '\item'
  prepare_Rd: real2canon.rd:31: unknown macro '\item'
  prepare_Rd: real2canon.rd:57: unexpected '}'
  prepare_Rd: reduc.rd:24: unknown macro '\item'
  prepare_Rd: reduc.rd:27: unknown macro '\item'
  prepare_Rd: reduc.rd:30: unknown macro '\item'
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable compilation flags in Makevars ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... ERROR
  Running examples in 'MLEcens-Ex.R' failed.
  The error most likely occurred in:
  
  > ### * actg181
  >
  > flush(stderr()); flush(stdout())
  >
  > ### Name: actg181
  > ### Title: Data from the Aids Clinical Trials Group protocol ACTG 181
  > ### Aliases: actg181
  > ### Keywords: datasets
  >
  > ### ** Examples
  >
  > # Load the data
  > data(actg181)
  >
  > # Compute the MLE
  > mle <- computeMLE(R=actg181, B=c(1,1,1,1))
  Error in computeMLE(R = actg181, B = c(1, 1, 1, 1)) :
  BLAS/LAPACK routine 'DSPTRS' gave error code -7
  Calls: computeMLE -> .Call
  Execution halted
  Time 0:28.77, 13.00 + 2.67