• using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/AMORE.Rcheck'
• using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
• using session charset: UTF-8
• checking for file 'AMORE/DESCRIPTION' ... OK
• this is package 'AMORE' version '0.2-11'
• package encoding: UTF-8
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'AMORE' can be installed ... WARNING
  Found the following significant warnings:
  Warning: ./man/deltaE.Rd:12: unknown macro '\item'
  Warning: ./man/deltaE.Rd:13: unknown macro '\item'
  Warning: ./man/deltaE.Rd:14: unknown macro '\item'
  Warning: ./man/deltaE.Rd:28: unknown macro '\item'
  Warning: ./man/deltaE.Rd:29: unknown macro '\item'
  Warning: ./man/deltaE.Rd:30: unknown macro '\item'
  Warning: bad markup (extra space?) at init.MLPneuron.Rd:14:12
  See http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-sun/AMORE-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... WARNING
  prepare_Rd: deltaE.Rd:12: unknown macro '\item'
  prepare_Rd: deltaE.Rd:13: unknown macro '\item'
  prepare_Rd: deltaE.Rd:14: unknown macro '\item'
  prepare_Rd: deltaE.Rd:28: unknown macro '\item'
  prepare_Rd: deltaE.Rd:29: unknown macro '\item'
  prepare_Rd: deltaE.Rd:30: unknown macro '\item'
  prepare_Rd: bad markup (extra space?) at init.MLPneuron.Rd:14:12
• checking Rd metadata ... WARNING
  Rd files with duplicated name 'error.TAO':
  deltaE.Rd taofun.Rd
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... WARNING
  Argument items with no description in Rd object 'init.MLPneuron':
  bias
  
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
  
  WARNING: There were 4 warnings, see
  /data/gannet/tmp/ripley/R/packages/tests-Sun/AMORE.Rcheck/00check.log
  for details
  
  Time 0:26.56, 11.94 + 2.49