• using log directory '/data/gannet/tmp/ripley/R/packages/tests-Sun/AIS.Rcheck'
• using R version 2.11.0 Under development (unstable) (2010-02-03 r51097)
• using session charset: UTF-8
• checking for file 'AIS/DESCRIPTION' ... OK
• this is package 'AIS' version '1.0'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'AIS' can be installed ... WARNING
  Found the following significant warnings:
  Warning: bad markup (extra space?) at HTMLDWIMxtabs.Rd:14:25
  Warning: bad markup (extra space?) at HTMLDWIMxtabs.Rd:15:20
  Warning: bad markup (extra space?) at HTMLDWIMxtabs.Rd:16:19
  Warning: bad markup (extra space?) at HTMLDWIMxtabs.Rd:17:20
  Warning: ./man/HTMLDWIMxtabs.Rd:39: unexpected '}'
  Warning: bad markup (extra space?) at printDWIMxtabs.Rd:14:25
  Warning: bad markup (extra space?) at printDWIMxtabs.Rd:15:20
  Warning: bad markup (extra space?) at printDWIMxtabs.Rd:16:19
  Warning: bad markup (extra space?) at printDWIMxtabs.Rd:17:20
  Warning: ./man/printDWIMxtabs.Rd:36: unexpected '}'
  See http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-sun/AIS-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... WARNING
  Non-standard license specification:
  GPL AFFERO 3.0 (with citation)
  Standardizable: FALSE
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  plot.AISFirstLook: no visible global function definition for ‘parcoord’
• checking Rd files ... WARNING
  prepare_Rd: bad markup (extra space?) at HTMLDWIMxtabs.Rd:14:25
  prepare_Rd: bad markup (extra space?) at HTMLDWIMxtabs.Rd:15:20
  prepare_Rd: bad markup (extra space?) at HTMLDWIMxtabs.Rd:16:19
  prepare_Rd: bad markup (extra space?) at HTMLDWIMxtabs.Rd:17:20
  prepare_Rd: HTMLDWIMxtabs.Rd:39: unexpected '}'
  prepare_Rd: bad markup (extra space?) at printDWIMxtabs.Rd:14:25
  prepare_Rd: bad markup (extra space?) at printDWIMxtabs.Rd:15:20
  prepare_Rd: bad markup (extra space?) at printDWIMxtabs.Rd:16:19
  prepare_Rd: bad markup (extra space?) at printDWIMxtabs.Rd:17:20
  prepare_Rd: printDWIMxtabs.Rd:36: unexpected '}'
• checking Rd metadata ... OK
• checking Rd cross-references ... WARNING
  Unknown package(s) ‘pkg’ in Rd xrefs
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'print.DWIMxtabs':
  print.DWIMxtabs
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter 'Writing R documentation files' in manual 'Writing R
  Extensions'.
• checking Rd contents ... WARNING
  Argument items with no description in Rd object 'HTML.DWIMxtabs':
  wantPercentages wantTotals wantStats nameLength
  
  Argument items with no description in Rd object 'print.DWIMxtabs':
  wantPercentages wantTotals wantStats nameLength
  
• checking examples ... OK
• checking PDF version of manual ... OK
  
  WARNING: There were 5 warnings, see
  /data/gannet/tmp/ripley/R/packages/tests-Sun/AIS.Rcheck/00check.log
  for details
  
  Time 0:21.23, 9.55 + 2.16