• using R version 2.11.0 Under development (unstable) (2009-11-24 r50554)
• using session charset: UTF-8
• checking for file 'robust/DESCRIPTION' ... OK
• this is package 'robust' version '0.3-9'
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'robust' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  lmRob.fit.compute: no visible global function definition for
  ‘guiDisplayDialog’
  lmRob.fit.compute: no visible binding for global variable ‘yes.p’
  plot.covfm: no visible global function definition for ‘guiModify’
  plot.glmfm: no visible global function definition for ‘guiModify’
  plot.lmfm: no visible global function definition for ‘guiModify’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable compilation flags in Makevars ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... OK
• checking differences from 'robust-Ex.Rout' to 'robust-Ex.Rout.save' ...
  3c3
  < Scalable Robust Estimators with High Breakdown Point (version 1.0-00)
  ---
  > Scalable Robust Estimators with High Breakdown Point (version 0.5-02)
  14,15c14,15
  < > cleanEx()
  < > nameEx("add1.lmRob")
  ---
  > > assign(".oldNS", loadedNamespaces(), pos = 'CheckExEnv')
  > > cleanEx(); nameEx("add1.lmRob")
  44,45c44
  < > cleanEx()
  < > nameEx("anova.glmRob")
  ---
  > > cleanEx(); nameEx("anova.glmRob")
  83,84c82
  < > cleanEx()
  < > nameEx("anova.lmRob")
  ---
  > > cleanEx(); nameEx("anova.lmRob")
  114,115c112,113
  < [1,] 1 1
  < [2,] 2 1 1 27.354 9.84e-08 ***
  ---
  > [1,] 1.000 1.000
  > [2,] 2.000 1.000 1 27.354 9.84e-08 ***
  121,122c119
  < > cleanEx()
  < > nameEx("arg.names")
  ---
  > > cleanEx(); nameEx("arg.names")
  139,140c136
  < > cleanEx()
  < > nameEx("breslow.dat")
  ---
  > > cleanEx(); nameEx("breslow.dat")
  156,157c152
  < > cleanEx()
  < > nameEx("ccov")
  ---
  > > cleanEx(); nameEx("ccov")
  187,188c182
  < > cleanEx()
  < > nameEx("coef.glmfm")
  ---
  > > cleanEx(); nameEx("coef.glmfm")
  211,212c205
  < > cleanEx()
  < > nameEx("coef.lmfm")
  ---
  > > cleanEx(); nameEx("coef.lmfm")
  233,234c226
  < > cleanEx()
  < > nameEx("covRob")
  ---
  > > cleanEx(); nameEx("covRob")
  264,265c256
  < > cleanEx()
  < > nameEx("covRob.control")
  ---
  > > cleanEx(); nameEx("covRob.control")
  285,286c276
  < > cleanEx()
  < > nameEx("covfmDistance2Plot")
  ---
  > > cleanEx(); nameEx("covfmDistance2Plot")
  305,306c295
  < > cleanEx()
  < > nameEx("covfmEllipsesPlot")
  ---
  > > cleanEx(); nameEx("covfmEllipsesPlot")
  325,326c314
  < > cleanEx()
  < > nameEx("covfmScreePlot")
  ---
  > > cleanEx(); nameEx("covfmScreePlot")
  345,346c333
  < > cleanEx()
  < > nameEx("covfmSqrtMDPlot")
  ---
  > > cleanEx(); nameEx("covfmSqrtMDPlot")
  365,366c352
  < > cleanEx()
  < > nameEx("drop1.lmRob")
  ---
  > > cleanEx(); nameEx("drop1.lmRob")
  397,398c383
  < > cleanEx()
  < > nameEx("fit.models")
  ---
  > > cleanEx(); nameEx("fit.models")
  421,422c406
  < > cleanEx()
  < > nameEx("get.fit.models.database")
  ---
  > > cleanEx(); nameEx("get.fit.models.database")
  516,517c500
  < > cleanEx()
  < > nameEx("glmRob")
  ---
  > > cleanEx(); nameEx("glmRob")
  548,549c531
  < > cleanEx()
  < > nameEx("glmRob.mallows")
  ---
  > > cleanEx(); nameEx("glmRob.mallows")
  577,578c559
  < > cleanEx()
  < > nameEx("glmRob.misclass")
  ---
  > > cleanEx(); nameEx("glmRob.misclass")
  608,609c589
  < > cleanEx()
  < > nameEx("leuk.dat")
  ---
  > > cleanEx(); nameEx("leuk.dat")
  625,626c605
  < > cleanEx()
  < > nameEx("lmRob")
  ---
  > > cleanEx(); nameEx("lmRob")
  643,644c622
  < > cleanEx()
  < > nameEx("lmRob.RFPE")
  ---
  > > cleanEx(); nameEx("lmRob.RFPE")
  663,664c641
  < > cleanEx()
  < > nameEx("lmRob.control")
  ---
  > > cleanEx(); nameEx("lmRob.control")
  682,683c659
  < > cleanEx()
  < > nameEx("mallows.dat")
  ---
  > > cleanEx(); nameEx("mallows.dat")
  699,700c675
  < > cleanEx()
  < > nameEx("methods.glmRob")
  ---
  > > cleanEx(); nameEx("methods.glmRob")
  879,880c854
  < > cleanEx()
  < > nameEx("methods.lmRob")
  ---
  > > cleanEx(); nameEx("methods.lmRob")
  967,968c941
  < > cleanEx()
  < > nameEx("plot.covfm")
  ---
  > > cleanEx(); nameEx("plot.covfm")
  992,993c965
  < > cleanEx()
  < > nameEx("plot.lmRob")
  ---
  > > cleanEx(); nameEx("plot.lmRob")
  1011,1012c983
  < > cleanEx()
  < > nameEx("plot.lmfm")
  ---
  > > cleanEx(); nameEx("plot.lmfm")
  1030,1031c1001
  < > cleanEx()
  < > nameEx("predict.glmRob")
  ---
  > > cleanEx(); nameEx("predict.glmRob")
  1065,1066c1035
  < > cleanEx()
  < > nameEx("predict.lmRob")
  ---
  > > cleanEx(); nameEx("predict.lmRob")
  1105,1106c1074
  < > cleanEx()
  < > nameEx("print.covfm")
  ---
  > > cleanEx(); nameEx("print.covfm")
  1179,1180c1147
  < > cleanEx()
  < > nameEx("print.glmRob")
  ---
  > > cleanEx(); nameEx("print.glmRob")
  1223,1224c1190
  < > cleanEx()
  < > nameEx("print.glmfm")
  ---
  > > cleanEx(); nameEx("print.glmfm")
  1281,1282c1247
  < > cleanEx()
  < > nameEx("print.lmRob")
  ---
  > > cleanEx(); nameEx("print.lmRob")
  1319,1320c1284
  < > cleanEx()
  < > nameEx("print.lmfm")
  ---
  > > cleanEx(); nameEx("print.lmfm")
  1353,1354c1317
  < > cleanEx()
  < > nameEx("print.summary.covfm")
  ---
  > > cleanEx(); nameEx("print.summary.covfm")
  1457,1458c1420
  < > cleanEx()
  < > nameEx("print.summary.glmRob")
  ---
  > > cleanEx(); nameEx("print.summary.glmRob")
  1536,1537c1498
  < > cleanEx()
  < > nameEx("print.summary.glmfm")
  ---
  > > cleanEx(); nameEx("print.summary.glmfm")
  1615,1616c1576
  < > cleanEx()
  < > nameEx("print.summary.lmRob")
  ---
  > > cleanEx(); nameEx("print.summary.lmRob")
  1655,1656c1615
  < > cleanEx()
  < > nameEx("print.summary.lmfm")
  ---
  > > cleanEx(); nameEx("print.summary.lmfm")
  1744,1745c1703
  < > cleanEx()
  < > nameEx("stack.dat")
  ---
  > > cleanEx(); nameEx("stack.dat")
  1784,1785c1742
  < > cleanEx()
  < > nameEx("step.lmRob")
  ---
  > > cleanEx(); nameEx("step.lmRob")
  1856d1812
  < >
  1886,1887c1842
  < > cleanEx()
  < > nameEx("summary.covfm")
  ---
  > > cleanEx(); nameEx("summary.covfm")
  1912,1913c1867
  < > cleanEx()
  < > nameEx("summary.glmRob")
  ---
  > > cleanEx(); nameEx("summary.glmRob")
  1961,1962c1915
  < > cleanEx()
  < > nameEx("summary.glmfm")
  ---
  > > cleanEx(); nameEx("summary.glmfm")
  2011,2012c1964
  < > cleanEx()
  < > nameEx("summary.lmRob")
  ---
  > > cleanEx(); nameEx("summary.lmRob")
  2080,2081c2032
  < > cleanEx()
  < > nameEx("summary.lmfm")
  ---
  > > cleanEx(); nameEx("summary.lmfm")
  2134,2135c2085
  < > cleanEx()
  < > nameEx("weight.funs")
  ---
  > > cleanEx(); nameEx("weight.funs")
  2163,2164c2113
  < > cleanEx()
  < > nameEx("woodmod.dat")
  ---
  > > cleanEx(); nameEx("woodmod.dat")
  OK
• checking tests ... OK
• checking PDF version of manual ... OK