- using R version 2.11.0 Under development (unstable) (2010-01-14 r50981)
- using session charset: UTF-8
- checking for file 'VGAM/DESCRIPTION' ... OK
- this is package 'VGAM' version '0.7-10'
- checking package name space information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking for executable files ... OK
- checking whether package 'VGAM' can be installed ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the name space can be loaded with stated dependencies ... OK
- checking whether the name space can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
Coef.qrrvglm: no visible binding for global variable ‘optimum’
Coef.qrrvglm: no visible binding for global variable ‘Darray’
Coef.qrrvglm: no visible binding for global variable ‘Tolerance’
callcqof: no visible binding for '<<-' assignment to
‘.VGAM.CQO.cmatrix’
callcqof: no visible binding for '<<-' assignment to
‘.VGAM.CQO.ocmatrix’
calldcaof: no visible binding for global variable ‘p1’
calldcaof: no visible binding for global variable ‘U’
calldcaof: no visible binding for global variable ‘queue’
calldcaof: no visible binding for global variable ‘qbig’
calldcaof: no visible binding for global variable ‘spar2’
calldcaof: no visible binding for global variable ‘df2.nl’
cao.fit: no visible binding for global variable ‘maxitl’
cao.fit: no visible binding for global variable ‘fv’
cqo.fit: no visible binding for global variable ‘modelno’
cqo.fit: no visible binding for global variable ‘quasi.newton’
cqo.fit: no visible binding for global variable ‘NOS’
cqo.fit: no visible binding for global variable ‘z’
cqo.fit: no visible binding for global variable ‘fv’
loglinb3 : <anonymous>: no visible binding for global variable ‘u3’
loglinb3 : <anonymous>: no visible binding for global variable ‘u2’
loglinb3 : <anonymous>: no visible binding for global variable ‘u23’
loglinb3 : <anonymous>: no visible binding for global variable ‘u1’
loglinb3 : <anonymous>: no visible binding for global variable ‘u13’
loglinb3 : <anonymous>: no visible binding for global variable ‘u12’
loglinb3 : <anonymous>: no visible binding for global variable ‘denom’
rrvglm.fit: no visible binding for global variable ‘modelno’
rrvglm.fit: no visible binding for global variable ‘fv’
rrvglm.fit: no visible binding for global variable ‘one.more’
rrvglm.fit: no visible binding for global variable ‘rrr.expression’
uqo.fit: no visible binding for global variable ‘CQO.FastAlgorithm’
vgam.fit: no visible binding for global variable ‘fv’
vglm.fit: no visible binding for global variable ‘fv’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking data for non-ASCII characters ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $BLAS_LIBS ... OK
- checking examples ... ERROR
Running examples in 'VGAM-Ex.R' failed.
The error most likely occurred in:
> ### * zetaff
>
> flush(stderr()); flush(stdout())
>
> ### Name: zetaff
> ### Title: Zeta Distribution Family Function
> ### Aliases: zetaff
> ### Keywords: models regression
>
> ### ** Examples
>
> zdata = data.frame(y = 1:5, w = c(63, 14, 5, 1, 2)) # Knight, p.304
> fit = vglm(y ~ 1, zetaff, zdata, trace=TRUE, wei=w, crit="c")
VGLM linear loop 1 : coefficients = 0.520107079
*** caught segfault ***
address 0x5aaa000, cause 'memory not mapped'