• using R version 2.11.0 Under development (unstable) (2010-01-14 r50981)
  • using session charset: UTF-8
  • checking for file 'GExMap/DESCRIPTION' ... OK
  • this is package 'GExMap' version '1.0'
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'GExMap' can be installed ... WARNING
    Found the following significant warnings:
    Warning: ./man/gexmap.Rd:27: unexpected '}'
    See http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-gcc/GExMap-00install.html for details.
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... NOTE
    Non-standard license specification:
    GPL version 2 or newer
    Standardizable: TRUE
    Standardized license specification:
    GPL (>= 2)
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    gexload.corr: no visible binding for global variable ‘corr’
  • checking Rd files ... WARNING
    prepare_Rd: gex.mapping.Rd:20-21: Dropping empty section \value
    prepare_Rd: gex.mapping.Rd:24-25: Dropping empty section \note
    prepare_Rd: gex.mapping.Rd:22: Dropping empty section \references
    prepare_Rd: gexgo.Rd:27-28: Dropping empty section \note
    prepare_Rd: gexgo.Rd:25: Dropping empty section \references
    prepare_Rd: gexgraph.Rd:24-25: Dropping empty section \note
    prepare_Rd: gexgraph.Rd:22: Dropping empty section \references
    prepare_Rd: gexload.corr.Rd:20-21: Dropping empty section \value
    prepare_Rd: gexload.corr.Rd:24-25: Dropping empty section \note
    prepare_Rd: gexload.corr.Rd:22: Dropping empty section \references
    prepare_Rd: gexload.data.Rd:17-18: Dropping empty section \value
    prepare_Rd: gexload.data.Rd:21-22: Dropping empty section \note
    prepare_Rd: gexload.data.Rd:19: Dropping empty section \references
    prepare_Rd: gexmap.Rd:27: unexpected '}'
    prepare_Rd: gexmap.Rd:28-29: Dropping empty section \details
    prepare_Rd: gexmap.Rd:30-31: Dropping empty section \value
    prepare_Rd: gexmap.Rd:34-35: Dropping empty section \note
    prepare_Rd: gexmap.Rd:36: Dropping empty section \seealso
    prepare_Rd: gextest.Rd:44-45: Dropping empty section \value
    prepare_Rd: gextest.Rd:48-49: Dropping empty section \note
    prepare_Rd: gextest.Rd:46: Dropping empty section \references
    prepare_Rd: corr.rd:10-11: Dropping empty section \value
    prepare_Rd: corr.rd:14-15: Dropping empty section \note
    prepare_Rd: corr.rd:12: Dropping empty section \references
    prepare_Rd: data.rd:13-14: Dropping empty section \value
    prepare_Rd: data.rd:17-18: Dropping empty section \note
    prepare_Rd: data.rd:15: Dropping empty section \references
    prepare_Rd: go.rd:10-11: Dropping empty section \value
    prepare_Rd: go.rd:14-15: Dropping empty section \note
    prepare_Rd: go.rd:12: Dropping empty section \references
    prepare_Rd: list.rd:13-14: Dropping empty section \value
    prepare_Rd: list.rd:17-18: Dropping empty section \note
    prepare_Rd: list.rd:15: Dropping empty section \references
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking data for non-ASCII characters ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK