• using R version 2.11.0 Under development (unstable) (2010-01-14 r50981)
• using session charset: UTF-8
• checking for file 'BLCOP/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'BLCOP' version '0.2.2'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'BLCOP' can be installed ... WARNING
  Found the following significant warnings:
  Warning: bad markup (extra space?) at runBLCOPTestSuite.Rd:13:18
  See http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-gcc/BLCOP-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... WARNING
  prepare_Rd: BLResult-class.Rd:33-35: Dropping empty section \examples
  prepare_Rd: BLViews-class.Rd:30-32: Dropping empty section \examples
  prepare_Rd: COPResult-class.Rd:33-35: Dropping empty section \examples
  checkRd: (5) COPViews-class.Rd:11: Tag \code is invalid in a \code block
  checkRd: (5) addBLViews.Rd:39: Tag \code is invalid in a \code block
  prepare_Rd: replacers.Rd:27-29: Dropping empty section \examples
  prepare_Rd: bad markup (extra space?) at runBLCOPTestSuite.Rd:13:18
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... WARNING
  S4 class codoc mismatches from documentation object 'BLResult-class':
  Slots for class 'BLResult'
  Code: kappa posteriorCovar posteriorMean priorCovar priorMean tau
  views
  Docs: confIgnored posteriorCovar posteriorMean priorCovar priorMean
  tau views
  
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking PDF version of manual ... OK