• using R Under development (unstable) (2012-08-14 r60253)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘randomLCA/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘randomLCA’ version ‘0.8-3’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking whether package ‘randomLCA’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  plot.randomLCA: no visible binding for global variable ‘outcome’
• checking Rd files ... NOTE
  prepare_Rd: AIC.Rd:17-18: Dropping empty section \value
  prepare_Rd: AIC.Rd:20-21: Dropping empty section \examples
  prepare_Rd: BIC.Rd:17-18: Dropping empty section \value
  prepare_Rd: BIC.Rd:20-21: Dropping empty section \examples
  prepare_Rd: fitted.Rd:19-20: Dropping empty section \examples
  prepare_Rd: logLik.Rd:17-18: Dropping empty section \value
  prepare_Rd: logLik.Rd:20-21: Dropping empty section \examples
  prepare_Rd: outcome.probs.Rd:23-24: Dropping empty section \value
  prepare_Rd: ranef.Rd:18-19: Dropping empty section \examples
  prepare_Rd: simulate.Rd:15-16: Dropping empty section \details
  prepare_Rd: simulate.Rd:17-18: Dropping empty section \value
  prepare_Rd: simulate.Rd:20-21: Dropping empty section \examples
  prepare_Rd: summary.Rd:33-34: Dropping empty section \examples
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [75s/76s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [49s/50s] OK
• checking re-building of vignette PDFs ... [52s/53s] OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/data/blackswan/ripley/R/packages/tests-devel/randomLCA.Rcheck/00check.log’
  for details.