• using R Under development (unstable) (2012-05-22 r59405)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘mboost/DESCRIPTION’ ... OK
  • this is package ‘mboost’ version ‘2.1-2’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package ‘mboost’ can be installed ... [12s/16s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking examples ... [94s/126s] OK
  • checking differences from ‘mboost-Ex.Rout’ to ‘mboost-Ex.Rout.save’ ...
    1195a1196,1202
    >
    > Attaching package: 'Matrix'
    >
    > The following object(s) are masked from 'package:base':
    >
    > det
    >
    OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [283s/402s] OK
    Running ‘birds_Biometrics.R’ [22s/33s]
    Comparing ‘birds_Biometrics.Rout’ to ‘birds_Biometrics.Rout.save’ ... OK
    Running ‘bugfixes.R’ [66s/90s]
    Comparing ‘bugfixes.Rout’ to ‘bugfixes.Rout.save’ ...5a6,12
    >
    > Attaching package: 'Matrix'
    >
    > The following object(s) are masked from 'package:base':
    >
    > det
    >
    599,602c606,609
    < Spam version 0.29-1 (2012-05-05) is loaded.
    < Type 'help( Spam)' or 'demo( spam)' for a short introduction
    < and overview of this package.
    < Help for individual functions is also obtained by adding the
    ---
    > Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
    > Type demo( spam) for some demos, help( Spam) for an overview
    > of this package.
    > Help for individual functions is optained by adding the
    614a622,625
    > The following object(s) are masked from 'package:Matrix':
    >
    > norm
    >
    617c628
    < backsolve, forwardsolve
    ---
    > backsolve, forwardsolve, norm
    Running ‘regtest-baselearner.R’ [75s/103s]
    Comparing ‘regtest-baselearner.Rout’ to ‘regtest-baselearner.Rout.save’ ...16a17,23
    >
    > Attaching package: 'Matrix'
    >
    > The following object(s) are masked from 'package:base':
    >
    > det
    >
    Running ‘regtest-blackboost.R’ [26s/37s]
    Comparing ‘regtest-blackboost.Rout’ to ‘regtest-blackboost.Rout.save’ ...52,53d51
    < Loaded gbm 1.6.3.2
    <
    Running ‘regtest-family.R’ [18s/25s]
    Comparing ‘regtest-family.Rout’ to ‘regtest-family.Rout.save’ ... OK
    Running ‘regtest-gamboost.R’ [26s/40s]
    Comparing ‘regtest-gamboost.Rout’ to ‘regtest-gamboost.Rout.save’ ... OK
    Running ‘regtest-glmboost.R’ [45s/66s]
    Comparing ‘regtest-glmboost.Rout’ to ‘regtest-glmboost.Rout.save’ ... OK
    Running ‘regtest-hatmatrix.R’
    Comparing ‘regtest-hatmatrix.Rout’ to ‘regtest-hatmatrix.Rout.save’ ... OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [230s/223s] OK
  • checking re-building of vignette PDFs ... [226s/204s] OK
  • checking PDF version of manual ... OK