- using R Under development (unstable) (2012-08-14 r60253)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘intamap/DESCRIPTION’ ... OK
- this is package ‘intamap’ version ‘1.3-15’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking whether package ‘intamap’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [15s/15s] OK
- checking for unstated dependencies in tests ... OK
- checking tests ... [59s/60s] OK
Running ‘anisotropyTest.R’
Comparing ‘anisotropyTest.Rout’ to ‘anisotropyTest.Rout.save’ ...250,251c250,251
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
253c253
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
257c257
< 1st Qu.: 20626 1st Qu.:136146 1st Qu.:142.4 1st Qu.:17222
---
> 1st Qu.: 20626 1st Qu.:136147 1st Qu.:142.4 1st Qu.:17222
Running ‘block.R’ [11s/11s]
Comparing ‘block.Rout’ to ‘block.Rout.save’ ...76,77c76,77
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
79c79
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
100c100
< 1st Qu.:0.0005133 1st Qu.:6.764 1st Qu.:0.08598 1st Qu.:4.464
---
> 1st Qu.:0.0005133 1st Qu.:6.764 1st Qu.:0.08599 1st Qu.:4.464
103,104c103,104
< 3rd Qu.:0.0481948 3rd Qu.:7.596 3rd Qu.:0.40690 3rd Qu.:5.094
< Max. :0.0945648 Max. :8.351 Max. :0.68392 Max. :5.946
---
> 3rd Qu.:0.0481948 3rd Qu.:7.595 3rd Qu.:0.40690 3rd Qu.:5.094
> Max. :0.0945648 Max. :8.351 Max. :0.68391 Max. :5.946
Running ‘idw.R’
Comparing ‘idw.Rout’ to ‘idw.Rout.save’ ...128,129c128,129
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
Running ‘interpolate.R’ [16s/16s]
Comparing ‘interpolate.Rout’ to ‘interpolate.Rout.save’ ...25c25
< R 2012-08-14 15:55:47 interpolating 155 observations, 3103 prediction locations
---
> R 2012-07-24 15:50:42 interpolating 155 observations, 3103 prediction locations
28,29c28,29
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
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< 3rd Qu.:180580 3rd Qu.:332140 3rd Qu.: 544.9 3rd Qu.: 69336
---
> 3rd Qu.:180580 3rd Qu.:332140 3rd Qu.: 544.9 3rd Qu.: 69337
52c52
< 3rd Qu.: 618.9 3rd Qu.: 643.0 3rd Qu.: 654.8 3rd Qu.: 582.3
---
> 3rd Qu.: 618.8 3rd Qu.: 643.0 3rd Qu.: 654.8 3rd Qu.: 582.3
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< R 2012-08-14 15:55:55 interpolating 155 observations, 3103 prediction locations
---
> R 2012-07-24 15:50:51 interpolating 155 observations, 3103 prediction locations
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< R 2012-08-14 15:55:59 interpolating 155 observations, 3103 prediction locations
---
> R 2012-07-24 15:50:54 interpolating 155 observations, 3103 prediction locations
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< R 2012-08-14 15:56:00 interpolating 30 observations, 24 prediction locations
---
> R 2012-07-24 15:50:55 interpolating 30 observations, 24 prediction locations
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< R 2012-08-14 15:56:01 interpolating 30 observations, 24 prediction locations
---
> R 2012-07-24 15:50:57 interpolating 30 observations, 24 prediction locations
Running ‘interpolateBlock.R’
Comparing ‘interpolateBlock.Rout’ to ‘interpolateBlock.Rout.save’ ...31c31
< R 2012-08-14 15:56:03 interpolating 155 observations, 48 prediction locations
---
> R 2012-07-24 15:50:59 interpolating 155 observations, 48 prediction locations
36,37c36,37
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
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< R 2012-08-14 15:56:04 interpolating 155 observations, 48 prediction locations
---
> R 2012-07-24 15:50:59 interpolating 155 observations, 48 prediction locations
Running ‘javaR.R’
Comparing ‘javaR.Rout’ to ‘javaR.Rout.save’ ...49,50c49,50
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
Running ‘linearVariogram.R’
Comparing ‘linearVariogram.Rout’ to ‘linearVariogram.Rout.save’ ...60,61c60,61
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
Running ‘minimal.R’
Comparing ‘minimal.Rout’ to ‘minimal.Rout.save’ ...56,57c56,57
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
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< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
Running ‘transGaussian.R’
Comparing ‘transGaussian.Rout’ to ‘transGaussian.Rout.save’ ...26c26
< R 2012-08-14 15:56:10 interpolating 155 observations, 3103 prediction locations
---
> R 2012-07-24 15:51:07 interpolating 155 observations, 3103 prediction locations
29,30c29,30
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
32c32
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
Running ‘unbiased.R’ [17s/17s]
Comparing ‘unbiased.Rout’ to ‘unbiased.Rout.save’ ...52,53c52,53
< Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
> Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
55c55
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
- checking PDF version of manual ... OK