• using R Under development (unstable) (2012-08-14 r60253)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘intamap/DESCRIPTION’ ... OK
  • this is package ‘intamap’ version ‘1.3-15’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking whether package ‘intamap’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... [15s/15s] OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [59s/60s] OK
    Running ‘anisotropyTest.R’
    Comparing ‘anisotropyTest.Rout’ to ‘anisotropyTest.Rout.save’ ...250,251c250,251
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    253c253
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    257c257
    < 1st Qu.: 20626 1st Qu.:136146 1st Qu.:142.4 1st Qu.:17222
    ---
    > 1st Qu.: 20626 1st Qu.:136147 1st Qu.:142.4 1st Qu.:17222
    Running ‘block.R’ [11s/11s]
    Comparing ‘block.Rout’ to ‘block.Rout.save’ ...76,77c76,77
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    79c79
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    100c100
    < 1st Qu.:0.0005133 1st Qu.:6.764 1st Qu.:0.08598 1st Qu.:4.464
    ---
    > 1st Qu.:0.0005133 1st Qu.:6.764 1st Qu.:0.08599 1st Qu.:4.464
    103,104c103,104
    < 3rd Qu.:0.0481948 3rd Qu.:7.596 3rd Qu.:0.40690 3rd Qu.:5.094
    < Max. :0.0945648 Max. :8.351 Max. :0.68392 Max. :5.946
    ---
    > 3rd Qu.:0.0481948 3rd Qu.:7.595 3rd Qu.:0.40690 3rd Qu.:5.094
    > Max. :0.0945648 Max. :8.351 Max. :0.68391 Max. :5.946
    Running ‘idw.R’
    Comparing ‘idw.Rout’ to ‘idw.Rout.save’ ...128,129c128,129
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    131c131
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    Running ‘interpolate.R’ [16s/16s]
    Comparing ‘interpolate.Rout’ to ‘interpolate.Rout.save’ ...25c25
    < R 2012-08-14 15:55:47 interpolating 155 observations, 3103 prediction locations
    ---
    > R 2012-07-24 15:50:42 interpolating 155 observations, 3103 prediction locations
    28,29c28,29
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    31c31
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    45c45
    < 3rd Qu.:180580 3rd Qu.:332140 3rd Qu.: 544.9 3rd Qu.: 69336
    ---
    > 3rd Qu.:180580 3rd Qu.:332140 3rd Qu.: 544.9 3rd Qu.: 69337
    52c52
    < 3rd Qu.: 618.9 3rd Qu.: 643.0 3rd Qu.: 654.8 3rd Qu.: 582.3
    ---
    > 3rd Qu.: 618.8 3rd Qu.: 643.0 3rd Qu.: 654.8 3rd Qu.: 582.3
    70c70
    < R 2012-08-14 15:55:55 interpolating 155 observations, 3103 prediction locations
    ---
    > R 2012-07-24 15:50:51 interpolating 155 observations, 3103 prediction locations
    410c410
    < R 2012-08-14 15:55:59 interpolating 155 observations, 3103 prediction locations
    ---
    > R 2012-07-24 15:50:54 interpolating 155 observations, 3103 prediction locations
    433c433
    < R 2012-08-14 15:56:00 interpolating 30 observations, 24 prediction locations
    ---
    > R 2012-07-24 15:50:55 interpolating 30 observations, 24 prediction locations
    440c440
    < R 2012-08-14 15:56:01 interpolating 30 observations, 24 prediction locations
    ---
    > R 2012-07-24 15:50:57 interpolating 30 observations, 24 prediction locations
    Running ‘interpolateBlock.R’
    Comparing ‘interpolateBlock.Rout’ to ‘interpolateBlock.Rout.save’ ...31c31
    < R 2012-08-14 15:56:03 interpolating 155 observations, 48 prediction locations
    ---
    > R 2012-07-24 15:50:59 interpolating 155 observations, 48 prediction locations
    36,37c36,37
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    39c39
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    79c79
    < R 2012-08-14 15:56:04 interpolating 155 observations, 48 prediction locations
    ---
    > R 2012-07-24 15:50:59 interpolating 155 observations, 48 prediction locations
    Running ‘javaR.R’
    Comparing ‘javaR.Rout’ to ‘javaR.Rout.save’ ...49,50c49,50
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    52c52
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    Running ‘linearVariogram.R’
    Comparing ‘linearVariogram.Rout’ to ‘linearVariogram.Rout.save’ ...60,61c60,61
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    63c63
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    Running ‘minimal.R’
    Comparing ‘minimal.Rout’ to ‘minimal.Rout.save’ ...56,57c56,57
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    59c59
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    Running ‘transGaussian.R’
    Comparing ‘transGaussian.Rout’ to ‘transGaussian.Rout.save’ ...26c26
    < R 2012-08-14 15:56:10 interpolating 155 observations, 3103 prediction locations
    ---
    > R 2012-07-24 15:51:07 interpolating 155 observations, 3103 prediction locations
    29,30c29,30
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    32c32
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
    Running ‘unbiased.R’ [17s/17s]
    Comparing ‘unbiased.Rout’ to ‘unbiased.Rout.save’ ...52,53c52,53
    < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
    < Path to GDAL shared files: /usr/share/gdal
    ---
    > Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
    > Path to GDAL shared files: C:/Program Files/R/R-2.15.1/library/rgdal/gdal
    55c55
    < Path to PROJ.4 shared files: (autodetected)
    ---
    > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.1/library/rgdal/proj
  • checking PDF version of manual ... OK