• using R Under development (unstable) (2012-08-14 r60253)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘granovaGG/DESCRIPTION’ ... OK
  • this is package ‘granovaGG’ version ‘1.1’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... NOTE
    Found the following hidden files and directories:
    .Rapp.history
    .gitignore
    These were most likely included in error. See section ‘Package
    structure’ in the ‘Writing R Extensions’ manual.
  • checking whether package ‘granovaGG’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    granovagg.1w : GetSummary: no visible binding for global variable
    ‘score’
    granovagg.1w : GetSummary: no visible binding for global variable
    ‘contrast’
    granovagg.1w : PrintGroupSummary: no visible binding for global
    variable ‘maximum.score’
    granovagg.1w : GrandMeanPoint: no visible binding for global variable
    ‘score’
    granovagg.1w : JitteredScoresByGroupContrast: no visible binding for
    global variable ‘contrast’
    granovagg.1w : JitteredScoresByGroupContrast: no visible binding for
    global variable ‘score’
    granovagg.1w : GroupMeanLine: no visible binding for global variable
    ‘x’
    granovagg.1w : GroupMeanLine: no visible binding for global variable
    ‘y’
    granovagg.1w : GroupMeanLine: no visible binding for global variable
    ‘xend’
    granovagg.1w : GroupMeanLine: no visible binding for global variable
    ‘yend’
    granovagg.1w : GroupMeansByContrast: no visible binding for global
    variable ‘contrast’
    granovagg.1w : GroupMeansByContrast: no visible binding for global
    variable ‘group.mean’
    granovagg.1w : Residuals: no visible binding for global variable
    ‘within.group.residuals’
    granovagg.1w : Residuals: no visible binding for global variable
    ‘within.1.sd.of.the.mean.of.all.residuals’
    granovagg.1w : OuterSquare: no visible binding for global variable
    ‘xmin’
    granovagg.1w : OuterSquare: no visible binding for global variable
    ‘xmax’
    granovagg.1w : OuterSquare: no visible binding for global variable
    ‘ymin’
    granovagg.1w : OuterSquare: no visible binding for global variable
    ‘ymax’
    granovagg.1w : OuterSquare: no visible binding for global variable
    ‘fill’
    granovagg.1w : InnerSquare: no visible binding for global variable
    ‘xmin’
    granovagg.1w : InnerSquare: no visible binding for global variable
    ‘xmax’
    granovagg.1w : InnerSquare: no visible binding for global variable
    ‘ymin’
    granovagg.1w : InnerSquare: no visible binding for global variable
    ‘ymax’
    granovagg.1w : InnerSquare: no visible binding for global variable
    ‘fill’
    granovagg.1w : SquaresText: no visible binding for global variable ‘x’
    granovagg.1w : SquaresText: no visible binding for global variable ‘y’
    granovagg.1w : SquaresText: no visible binding for global variable
    ‘label’
    granovagg.1w : WithinGroupVariation: no visible binding for global
    variable ‘x’
    granovagg.1w : WithinGroupVariation: no visible binding for global
    variable ‘ymin’
    granovagg.1w : WithinGroupVariation: no visible binding for global
    variable ‘ymax’
    granovagg.1w : MaxWithinGroupVariation: no visible binding for global
    variable ‘x’
    granovagg.1w : MaxWithinGroupVariation: no visible binding for global
    variable ‘ymin’
    granovagg.1w : MaxWithinGroupVariation: no visible binding for global
    variable ‘ymax’
    granovagg.1w : BaselineWithinGroupVariation: no visible binding for
    global variable ‘baseline.variation’
    granovagg.1w : BackgroundForGroupSizesAndLabels: no visible binding for
    global variable ‘ymin’
    granovagg.1w : BackgroundForGroupSizesAndLabels: no visible binding for
    global variable ‘ymax’
    granovagg.1w : BackgroundForGroupSizesAndLabels: no visible binding for
    global variable ‘xmin’
    granovagg.1w : BackgroundForGroupSizesAndLabels: no visible binding for
    global variable ‘xmax’
    granovagg.1w : GroupSizes: no visible binding for global variable ‘x’
    granovagg.1w : GroupSizes: no visible binding for global variable ‘y’
    granovagg.1w : GroupSizes: no visible binding for global variable
    ‘label’
    granovagg.1w : GroupSizes: no visible binding for global variable
    ‘angle’
    granovagg.1w : NonOverplottedGroupLabels: no visible binding for global
    variable ‘x’
    granovagg.1w : NonOverplottedGroupLabels: no visible binding for global
    variable ‘y’
    granovagg.1w : NonOverplottedGroupLabels: no visible binding for global
    variable ‘label’
    granovagg.1w : NonOverplottedGroupLabels: no visible binding for global
    variable ‘angle’
    granovagg.1w : NonOverplottedGroupLabels: no visible binding for global
    variable ‘overplotted’
    granovagg.1w : OverplottedGroupLabels: no visible binding for global
    variable ‘x’
    granovagg.1w : OverplottedGroupLabels: no visible binding for global
    variable ‘y’
    granovagg.1w : OverplottedGroupLabels: no visible binding for global
    variable ‘label’
    granovagg.1w : OverplottedGroupLabels: no visible binding for global
    variable ‘angle’
    granovagg.1w : OverplottedGroupLabels: no visible binding for global
    variable ‘overplotted’
    granovagg.1w : PrintOverplotWarning: no visible binding for global
    variable ‘overplotted’
    granovagg.1w : PrintOverplotWarning: no visible binding for global
    variable ‘group.mean’
    granovagg.1w : PrintOverplotWarning: no visible binding for global
    variable ‘contrast’
    granovagg.contr : GetSummary: no visible binding for global variable
    ‘x.values’
    granovagg.contr : GetSummary: no visible binding for global variable
    ‘y.values’
    granovagg.contr : JitteredResponsesByContrast: no visible binding for
    global variable ‘x.values’
    granovagg.contr : JitteredResponsesByContrast: no visible binding for
    global variable ‘y.values’
    granovagg.contr : EffectsOfContrasts: no visible binding for global
    variable ‘responses’
    granovagg.contr : ConnectEffectMeans: no visible binding for global
    variable ‘responses’
    granovagg.contr : GetGroupSummary: no visible binding for global
    variable ‘variable’
    granovagg.contr : GetGroupSummary: no visible binding for global
    variable ‘value’
    granovagg.contr : GetGroupSummary: no visible binding for global
    variable ‘standard.deviation’
    granovagg.contr : RawScoresByGroup: no visible binding for global
    variable ‘variable’
    granovagg.contr : RawScoresByGroup: no visible binding for global
    variable ‘value’
    granovagg.contr : MeansByGroup: no visible binding for global variable
    ‘group’
    granovagg.contr : MeansByGroup: no visible binding for global variable
    ‘group.mean’
    granovagg.contr : ConnectGroupResponseMeans: no visible binding for
    global variable ‘group’
    granovagg.contr : ConnectGroupResponseMeans: no visible binding for
    global variable ‘group.mean’
    granovagg.ds : GetCrossElementCoordinates: no visible binding for
    global variable ‘color’
    granovagg.ds : TreatmentLine: no visible binding for global variable
    ‘intercept’
    granovagg.ds : TreatmentLine: no visible binding for global variable
    ‘slope’
    granovagg.ds : TreatmentLine: no visible binding for global variable
    ‘color’
    granovagg.ds : Crossbow: no visible binding for global variable ‘x’
    granovagg.ds : Crossbow: no visible binding for global variable ‘y’
    granovagg.ds : Crossbow: no visible binding for global variable ‘x.end’
    granovagg.ds : Crossbow: no visible binding for global variable ‘y.end’
    granovagg.ds : CIBand: no visible binding for global variable ‘x’
    granovagg.ds : CIBand: no visible binding for global variable ‘y’
    granovagg.ds : CIBand: no visible binding for global variable ‘x.end’
    granovagg.ds : CIBand: no visible binding for global variable ‘y.end’
    granovagg.ds : CIBand: no visible binding for global variable ‘color’
    granovagg.ds : Shadows: no visible binding for global variable
    ‘x.shadow’
    granovagg.ds : Shadows: no visible binding for global variable
    ‘y.shadow’
    granovagg.ds : Trails: no visible binding for global variable
    ‘x.trail.start’
    granovagg.ds : Trails: no visible binding for global variable
    ‘y.trail.start’
    granovagg.ds : Trails: no visible binding for global variable
    ‘x.trail.end’
    granovagg.ds : Trails: no visible binding for global variable
    ‘y.trail.end’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... [17s/17s] OK
  • checking PDF version of manual ... OK
    NOTE: There were 2 notes.
    See
    ‘/data/blackswan/ripley/R/packages/tests-devel/granovaGG.Rcheck/00check.log’
    for details.