• using R Under development (unstable) (2012-05-22 r59405)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘drfit/DESCRIPTION’ ... OK
• this is package ‘drfit’ version ‘0.05-95’
• package encoding: latin1
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... WARNING
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
  CRAN requires a NAMESPACE file for all submissions.
• checking for executable files ... OK
• checking whether package ‘drfit’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  checkexperiment: no visible binding for global variable ‘type’
  checkexperiment: no visible binding for global variable ‘conc’
  drfit: no visible binding for global variable ‘ok’
  drfit: no visible binding for global variable ‘dose’
  drplot: no visible binding for global variable ‘dose’
  drplot: no visible binding for global variable ‘Substance’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ... OK
  Running ‘IM1xIPC81.R’
  Comparing ‘IM1xIPC81.Rout’ to ‘IM1xIPC81.Rout.save’ ...54,61c54,61
  < 1 IM13 BF4 9 81 0.59176 3.0000 inactive NA NA NA microM
  < 2 IM14 BF4 20 216 -0.01030 3.1761 no fit NA NA NA microM
  < 3 IM15 BF4 9 135 0.59176 3.0000 inactive NA NA NA microM
  < 4 IM16 BF4 9 108 0.59176 3.0000 inactive NA NA NA microM
  < 5 IM17 BF4 9 81 0.59176 3.0000 linlogit 2.5786 2.50572 2.66174 microM
  < 6 IM18 BF4 9 135 0.59176 3.0000 linlogit 1.6806 1.62297 1.74189 microM
  < 7 IM19 BF4 9 81 0.59176 3.0000 linlogit 1.6496 1.59848 1.70315 microM
  < 8 IM1-10 BF4 11 162 -0.01030 3.0000 linlogit 0.7697 0.68701 0.85442 microM
  ---
  > 1 IM13 BF4 9 81 0.591760 3.0000 inactive NA NA NA microM
  > 2 IM14 BF4 20 216 -0.010300 3.1761 no fit NA NA NA microM
  > 3 IM15 BF4 9 135 0.591760 3.0000 inactive NA NA NA microM
  > 4 IM16 BF4 9 108 0.591760 3.0000 inactive NA NA NA microM
  > 5 IM17 BF4 9 81 0.591760 3.0000 linlogit 2.5786 2.50572 2.66174 microM
  > 6 IM18 BF4 9 135 0.591760 3.0000 linlogit 1.6806 1.62297 1.74189 microM
  > 7 IM19 BF4 9 81 0.591760 3.0000 linlogit 1.6496 1.59848 1.70315 microM
  > 8 IM1-10 BF4 11 162 -0.010300 3.0000 linlogit 0.7697 0.68701 0.85442 microM
  Running ‘IM1xVibrio.R’
  Comparing ‘IM1xVibrio.Rout’ to ‘IM1xVibrio.Rout.save’ ...40,47c40,47
  < 1 IM13 BF4 13 22 -5.30103 4.699 probit 3.93991 3.86362 4.01601 microM
  < 2 IM14 BF4 12 57 -4.30103 4.699 probit 3.54421 3.50302 3.58555 microM
  < 3 IM15 BF4 7 20 -0.30103 4.699 probit 3.13985 3.11359 3.16624 microM
  < 4 IM16 BF4 13 30 -4.30103 4.699 probit 3.18042 3.14358 3.21762 microM
  < 5 IM17 BF4 10 20 -1.30103 4.699 probit 2.43173 2.36807 2.49512 microM
  < 6 IM18 BF4 10 17 -2.30103 2.699 probit 1.40152 1.31467 1.48806 microM
  < 7 IM19 BF4 13 22 -5.30103 2.699 probit 0.71579 0.67038 0.75925 microM
  < 8 IM1-10 BF4 11 20 -6.30103 2.699 probit -0.17903 -0.25694 -0.10372 microM
  ---
  > 1 IM13 BF4 13 22 -5.30103 4.6990 probit 3.93991 3.86362 4.01601 microM
  > 2 IM14 BF4 12 57 -4.30103 4.6990 probit 3.54421 3.50302 3.58555 microM
  > 3 IM15 BF4 7 20 -0.30103 4.6990 probit 3.13985 3.11359 3.16624 microM
  > 4 IM16 BF4 13 30 -4.30103 4.6990 probit 3.18042 3.14358 3.21762 microM
  > 5 IM17 BF4 10 20 -1.30103 4.6990 probit 2.43173 2.36807 2.49512 microM
  > 6 IM18 BF4 10 17 -2.30103 2.6990 probit 1.40152 1.31467 1.48806 microM
  > 7 IM19 BF4 13 22 -5.30103 2.6990 probit 0.71579 0.67038 0.75925 microM
  > 8 IM1-10 BF4 11 20 -6.30103 2.6990 probit -0.17903 -0.25694 -0.10372 microM
  Running ‘XY.R’
  Comparing ‘XY.Rout’ to ‘XY.Rout.save’ ... OK
  Running ‘antifoul.R’
  Comparing ‘antifoul.Rout’ to ‘antifoul.Rout.save’ ... OK
  Running ‘pyrithione.R’
  Comparing ‘pyrithione.Rout’ to ‘pyrithione.Rout.save’ ... OK
• checking PDF version of manual ... OK
  WARNING: There was 1 warning.
  NOTE: There was 1 note.
  See
  ‘/data/gannet/tmp/ripley/R/packages/tests-devel/drfit.Rcheck/00check.log’
  for details.