• using R Under development (unstable) (2012-05-22 r59405)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘distr/DESCRIPTION’ ... OK
  • this is package ‘distr’ version ‘2.3.3’
  • package encoding: latin1
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package ‘distr’ can be installed ... [20s/36s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... NOTE
    The following files should probably not be installed:
    ‘svn-multi.sty’, ‘svnkw.sty’

    Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
    or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
  • checking examples ... [155s/220s] OK
  • checking differences from ‘distr-Ex.Rout’ to ‘distr-Ex.Rout.save’ ...
    2c2
    < :startupmsg> Utilities for start-up messages (version 0.7.2)
    ---
    > :startupmsg> Utilities for start-up messages (version 0.7.1)
    8,9c8
    < :SweaveListingUtils> TeX listings package (version
    < :SweaveListingUtils> 0.5.5)
    ---
    > :SweaveListingUtils> TeX listings package (version 0.5)
    35c34
    < :distr> 2.3.3)
    ---
    > :distr> 2.3)
    79c78
    < 'integrate()' threw an error ---result may be inaccurate.
    ---
    > 'integrate()' threw an error ---hence a simpler approximation was used for standardizing the density which may be inaccurate; see 'distr:::.makeDNew'.
    576c575
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    580c579
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    585c584
    < [1] 0.7436411
    ---
    > [1] 0.743641
    622c621
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    626c625
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    1341c1340
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    1345c1344
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    1597c1596
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    1601c1600
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    1985,1986d1983
    < Warning in .makeDNew(dxy$x, dxy$y, standM = "int") :
    < 'integrate()' threw an error ---result may be inaccurate.
    2001c1998
    < .C(C_R_approxfun, as.double(x), as.double(y), as.integer(n),
    ---
    > .C("R_approxfun", as.double(x), as.double(y), as.integer(n),
    2006c2003
    < .C(C_R_approxfun, as.double(x), as.double(y), as.integer(n),
    ---
    > .C("R_approxfun", as.double(x), as.double(y), as.integer(n),
    2063,2064d2059
    < Warning in .makeDNew(dxy$x, dxy$y, standM = "int") :
    < 'integrate()' threw an error ---result may be inaccurate.
    2079c2074
    < .C(C_R_approxfun, as.double(x), as.double(y), as.integer(n),
    ---
    > .C("R_approxfun", as.double(x), as.double(y), as.integer(n),
    2084c2079
    < .C(C_R_approxfun, as.double(x), as.double(y), as.integer(n),
    ---
    > .C("R_approxfun", as.double(x), as.double(y), as.integer(n),
    2456c2451
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2460c2455
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    2523c2518
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2529c2524
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    2566c2561
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2570c2565
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    2720c2715
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2724c2719
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    2738c2733
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2742c2737
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    2975c2970
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    2979c2974
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    3047c3042
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    3051c3046
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    3266c3261
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    3270c3265
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    3286c3281
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    3290c3285
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    3783c3778
    < : :This part is accessible with 'discretePart(<obj>)'.
    ---
    > : :This part is accessible with 'discretePart()'.
    3789c3784
    < : :This part is accessible with 'acPart(<obj>)'.
    ---
    > : :This part is accessible with 'acPart()'.
    3810c3805
    < This part is accessible with 'discretePart(<obj>)'.
    ---
    > This part is accessible with 'discretePart()'.
    3814c3809
    < This part is accessible with 'acPart(<obj>)'.
    ---
    > This part is accessible with 'acPart()'.
    3838c3833
    < 1.145 0.058 2.185
    ---
    > 0.750 0.020 0.768
    3842c3837
    < 0.102 0.000 0.103
    ---
    > 0.040 0.000 0.038
    3859a3855
    > [1] "testclass"
    3876c3872
    < pdf
    ---
    > postscript
    OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... OK
  • checking re-building of vignette PDFs ... [8s/21s] OK
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/data/gannet/tmp/ripley/R/packages/tests-devel/distr.Rcheck/00check.log’
    for details.