• using R Under development (unstable) (2012-08-14 r60253)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘car/DESCRIPTION’ ... OK
  • this is package ‘car’ version ‘2.0-12’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... NOTE
    Found the following hidden files and directories:
    .project
    These were most likely included in error. See section ‘Package
    structure’ in the ‘Writing R Extensions’ manual.
  • checking whether package ‘car’ can be installed ... [10s/10s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    Anova.coxph: warning in Anova.default(mod, type = "II", test = "Chisq",
    vcov. = vcov(mod)): partial argument match of 'test' to
    'test.statistic'
    Anova.coxph: warning in Anova.default(mod, type = "III", test =
    "Chisq", vcov. = vcov(mod)): partial argument match of 'test' to
    'test.statistic'
    Anova.lm: warning in Anova.default(mod, type = type, vcov. = hccm(mod,
    type = white.adjust), test = "F", singular.ok = singular.ok): partial
    argument match of 'test' to 'test.statistic'
    car.select3d : <anonymous>: warning in rgl.user2window(x, y, z, proj =
    proj): partial argument match of 'proj' to 'projection'
    deltaMethod.lm: warning in assign("deltaMethodMessageFlag", TRUE, env =
    .GlobalEnv): partial argument match of 'env' to 'envir'
    scatter3d.default: warning in rgl.bg(col = bg.col, fogtype = fogtype):
    partial argument match of 'col' to 'color'
    bootCase.default: no visible binding for global variable ‘.boot.sample’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
    NOTE: There were 2 notes.
    See
    ‘/data/blackswan/ripley/R/packages/tests-devel/car.Rcheck/00check.log’
    for details.