• using R Under development (unstable) (2012-05-22 r59396)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘ModelGood/DESCRIPTION’ ... OK
• this is package ‘ModelGood’ version ‘1.0.1’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘ModelGood’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  MgPlans: warning in grep("^cv[0-9]+$", plan, val = TRUE, ignore.case =
  TRUE): partial argument match of 'val' to 'value'
  MgPlans: warning in grep("noinf", plan, val = FALSE, ignore.case =
  TRUE): partial argument match of 'val' to 'value'
  MgPlans: warning in grep("boot|plain", plan, val = FALSE, ignore.case =
  TRUE): partial argument match of 'val' to 'value'
  MgPlans: warning in grep("bootcv|out.of.bag|out-of-bag|b0|bootcv",
  plan, val = FALSE, ignore.case = TRUE): partial argument match of
  'val' to 'value'
  MgPlans: warning in grep("632", plan, val = FALSE, ignore.case = TRUE):
  partial argument match of 'val' to 'value'
  MgPlans: warning in grep("plus|\\+", plan, val = FALSE, ignore.case =
  TRUE): partial argument match of 'val' to 'value'
  MgResolveSmartArgs: warning in grep(allKeysRegexp, names(SmartArgs),
  val = FALSE, ignore.case = TRUE): partial argument match of 'val' to
  'value'
  MgResolveSmartArgs : <anonymous>: warning in grep(keyRegexp,
  names(SmartArgs), val = TRUE, ignore.case = TRUE): partial argument
  match of 'val' to 'value'
  Roc.formula: warning in match.call(expand = FALSE): partial argument
  match of 'expand' to 'expand.dots'
  predictStatusProb.BinaryTree: no visible global function definition for
  ‘treeresponse’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/data/gannet/tmp/ripley/R/packages/tests-devel/ModelGood.Rcheck/00check.log’
  for details.