• using R Under development (unstable) (2012-05-22 r59396)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘LogicForest/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘LogicForest’ version ‘2.0.0’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... WARNING
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
  CRAN requires a NAMESPACE file for all submissions.
• checking for executable files ... OK
• checking whether package ‘LogicForest’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... NOTE
  prepare_Rd: LBoost.Rd:34-35: Dropping empty section \details
  prepare_Rd: LogicForest-package.Rd:29-30: Dropping empty section \references
  prepare_Rd: LogicForest-package.Rd:33-34: Dropping empty section \seealso
  prepare_Rd: LogicForest-package.Rd:35-37: Dropping empty section \examples
  prepare_Rd: Perms.Rd:9-10: Dropping empty section \references
  prepare_Rd: TTab.Rd:11-12: Dropping empty section \references
  prepare_Rd: logforest.Rd:34-35: Dropping empty section \details
  prepare_Rd: pimp.mat.Rd:8-9: Dropping empty section \references
  prepare_Rd: proportion.positive.Rd:8-9: Dropping empty section \references
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
  by using R CMD build --resave-data
  old_size new_size compress
  LBoost.fit.rda 548Kb 69Kb xz
  logforest.fit.rda 506Kb 224Kb bzip2
• checking examples ... [38s/58s] OK
• checking PDF version of manual ... OK
  WARNING: There were 2 warnings.
  NOTE: There was 1 note.
  See
  ‘/data/gannet/tmp/ripley/R/packages/tests-devel/LogicForest.Rcheck/00check.log’
  for details.