• using R Under development (unstable) (2012-05-22 r59396)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘ACCLMA/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ACCLMA’ version ‘1.0’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... WARNING
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
  CRAN requires a NAMESPACE file for all submissions.
• checking for executable files ... OK
• checking whether package ‘ACCLMA’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... NOTE
  prepare_Rd: ACCLMA-package.Rd:33-34: Dropping empty section \seealso
  prepare_Rd: averageSameXs.Rd:16-18: Dropping empty section \details
  prepare_Rd: averageSameXs.Rd:24-26: Dropping empty section \note
  prepare_Rd: averageSameXs.Rd:20-22: Dropping empty section \references
  prepare_Rd: averageSameXs.Rd:30-32: Dropping empty section \seealso
  prepare_Rd: calcFX.Rd:14-16: Dropping empty section \details
  prepare_Rd: calcFX.Rd:22-24: Dropping empty section \note
  prepare_Rd: calcFX.Rd:18-20: Dropping empty section \references
  prepare_Rd: calcFX.Rd:28-30: Dropping empty section \seealso
  prepare_Rd: calcFY.Rd:17-19: Dropping empty section \details
  prepare_Rd: calcFY.Rd:25-27: Dropping empty section \note
  prepare_Rd: calcFY.Rd:21-23: Dropping empty section \references
  prepare_Rd: calcFY.Rd:31-33: Dropping empty section \seealso
  prepare_Rd: calcLMA.Rd:17-19: Dropping empty section \details
  prepare_Rd: calcLMA.Rd:25-27: Dropping empty section \note
  prepare_Rd: calcLMA.Rd:21-23: Dropping empty section \references
  prepare_Rd: calcLMA.Rd:31-33: Dropping empty section \seealso
  prepare_Rd: calcLOI.Rd:16-18: Dropping empty section \details
  prepare_Rd: calcLOI.Rd:24-26: Dropping empty section \note
  prepare_Rd: calcLOI.Rd:20-22: Dropping empty section \references
  prepare_Rd: calcLOI.Rd:30-32: Dropping empty section \seealso
  prepare_Rd: calcWeights.Rd:16-18: Dropping empty section \details
  prepare_Rd: calcWeights.Rd:24-26: Dropping empty section \note
  prepare_Rd: calcWeights.Rd:20-22: Dropping empty section \references
  prepare_Rd: calcWeights.Rd:30-32: Dropping empty section \seealso
  prepare_Rd: fillCSVData.Rd:19-21: Dropping empty section \details
  prepare_Rd: fillCSVData.Rd:27-29: Dropping empty section \note
  prepare_Rd: fillCSVData.Rd:23-25: Dropping empty section \references
  prepare_Rd: fillCSVData.Rd:33-35: Dropping empty section \seealso
  prepare_Rd: fillData.Rd:12-14: Dropping empty section \details
  prepare_Rd: fillData.Rd:20-22: Dropping empty section \note
  prepare_Rd: fillData.Rd:16-18: Dropping empty section \references
  prepare_Rd: fillData.Rd:26-28: Dropping empty section \seealso
  prepare_Rd: plotGraphs.Rd:17-19: Dropping empty section \details
  prepare_Rd: plotGraphs.Rd:25-27: Dropping empty section \note
  prepare_Rd: plotGraphs.Rd:21-23: Dropping empty section \references
  prepare_Rd: plotGraphs.Rd:31-33: Dropping empty section \seealso
  prepare_Rd: plotLMA.Rd:17-19: Dropping empty section \details
  prepare_Rd: plotLMA.Rd:25-27: Dropping empty section \note
  prepare_Rd: plotLMA.Rd:21-23: Dropping empty section \references
  prepare_Rd: plotLMA.Rd:31-33: Dropping empty section \seealso
  prepare_Rd: size.Rd:15-17: Dropping empty section \details
  prepare_Rd: size.Rd:23-25: Dropping empty section \note
  prepare_Rd: size.Rd:19-21: Dropping empty section \references
  prepare_Rd: size.Rd:29-31: Dropping empty section \seealso
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
  WARNING: There was 1 warning.
  NOTE: There was 1 note.
  See
  ‘/data/gannet/tmp/ripley/R/packages/tests-devel/ACCLMA.Rcheck/00check.log’
  for details.