• using R Under development (unstable) (2012-05-19 r59366)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘rpanel/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘rpanel’ version ‘1.0-6’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘rpanel’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File ‘rpanel/R/rpanel.r’:
  .onAttach calls:
  cat("Package `rpanel', version 1.0-6\n")
  cat("type help(rpanel) for summary information\n")
  
  Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
  See section ‘Good practice’ in ?.onAttach.
  
  rp.firth : firth.predict: warning in krige.control(obj.m = vfit,
  trend.d = panel$trend.setting, trend.l = panel$trend.setting):
  partial argument match of 'obj.m' to 'obj.model'
  rp.firth : firth.predict: warning in krige.conv(fg, loc = pred.grid,
  krige = KC, output = shh): partial argument match of 'loc' to
  'locations'
  rp.firth : firth.predict: warning in krige.conv(fg, loc = pg2, krige =
  KC, output = shh): partial argument match of 'loc' to 'locations'
  rp.gulls : collect.data: warning in assign(panel$df.name, gulls, env =
  .GlobalEnv): partial argument match of 'env' to 'envir'
  rp.likelihood : rp.loglik2: warning in rgl.bg(col = c("white",
  "black")): partial argument match of 'col' to 'color'
  rp.mururoa : mururoa.predict: warning in krige.control(obj.m = vfit,
  trend.d = panel$trend.setting, trend.l = panel$trend.setting):
  partial argument match of 'obj.m' to 'obj.model'
  rp.mururoa : mururoa.predict: warning in krige.conv(fg, loc =
  pred.grid, krige = KC, output = shh): partial argument match of 'loc'
  to 'locations'
  rp.mururoa : mururoa.predict: warning in krige.conv(fg, loc = pg2,
  krige = KC2, output = shh): partial argument match of 'loc' to
  'locations'
  rp.panelname: warning in exists(".rp.last.panel.name", env = .rpenv):
  partial argument match of 'env' to 'envir'
  rp.plot3d: warning in rgl.bg(col = c("white", "black")): partial
  argument match of 'col' to 'color'
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘lambda’
  rp.cartoons : panel.launch : rp.binomial: no visible binding for global
  variable ‘prob’
  rp.cartoons : panel.launch : rp.binomial: no visible binding for global
  variable ‘n’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘CofE’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Attend’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Giving’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘rodent’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Employ’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘aircond’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘tephra’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Al2O3’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘airpc’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Comp.1’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Comp.2’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Period’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘trawl’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Longitude’
  rp.cartoons : panel.launch: no visible binding for global variable
  ‘Score1’
  rp.ci: no visible binding for global variable ‘ssize’
  rp.firth : firth.points: no visible binding for global variable ‘plot1’
  rp.firth : firth.samp: no visible binding for global variable ‘plot1a’
  rp.firth : firth.samp: no visible binding for global variable
  ‘display.options’
  rp.firth : firth.samp: no visible binding for global variable
  ‘trend.setting’
  rp.firth : firth.samp: no visible binding for global variable
  ‘firth.true’
  rp.firth : firth.samp.redraw: no visible binding for global variable
  ‘plot1’
  rp.firth : firth.colour.chart.redraw: no visible binding for global
  variable ‘plot1a’
  rp.firth: no visible binding for global variable ‘plot1’
  rp.firth: no visible binding for global variable ‘stype’
  rp.firth: no visible binding for global variable ‘sp.type’
  rp.firth: no visible binding for global variable ‘str.type’
  rp.firth: no visible binding for global variable ‘npts’
  rp.firth: no visible binding for global variable ‘gx’
  rp.firth: no visible binding for global variable ‘gy’
  rp.firth: no visible binding for global variable ‘random.alignment’
  rp.geosim : graphics.update: no visible binding for global variable
  ‘plot1’
  rp.geosim : graphics.update: no visible binding for global variable
  ‘plot2’
  rp.geosim: no visible binding for global variable ‘plot1’
  rp.geosim: no visible binding for global variable ‘Range’
  rp.geosim: no visible binding for global variable ‘pSill’
  rp.geosim: no visible binding for global variable ‘Nugget’
  rp.geosim: no visible binding for global variable ‘display.checks’
  rp.geosim: no visible binding for global variable ‘vgm.checks’
  rp.geosim: no visible binding for global variable ‘points.only’
  rp.geosim: no visible binding for global variable ‘ngrid’
  rp.geosim: no visible binding for global variable ‘aniso.angle’
  rp.geosim: no visible binding for global variable ‘aniso.ratio’
  rp.gulls : click.capture: no visible binding for global variable
  ‘gulls.image’
  rp.gulls : collect.data: no visible binding for global variable
  ‘gulls.image’
  rp.gulls : collect.data: no visible binding for global variable ‘var1’
  rp.gulls : collect.data: no visible binding for global variable ‘var2’
  rp.gulls : collect.data: no visible binding for global variable ‘var3’
  rp.likelihood : rp.loglik1 : find.pt: no visible binding for global
  variable ‘plot1’
  rp.likelihood : rp.loglik1 : drag: no visible binding for global
  variable ‘plot1’
  rp.likelihood : rp.loglik1 : release: no visible binding for global
  variable ‘plot1’
  rp.likelihood : rp.loglik1 : loglik1.replot: no visible binding for
  global variable ‘plot1’
  rp.likelihood : rp.loglik1: no visible binding for global variable
  ‘plot1’
  rp.likelihood : rp.loglik1: no visible binding for global variable
  ‘display’
  rp.likelihood : rp.loglik1: no visible binding for global variable
  ‘prop’
  rp.likelihood : rp.loglik2: no visible binding for global variable
  ‘ranges’
  rp.likelihood : rp.loglik2: no visible binding for global variable
  ‘display’
  rp.logistic: no visible binding for global variable ‘alpha’
  rp.logistic: no visible binding for global variable ‘display’
  rp.mururoa : mururoa.points: no visible binding for global variable
  ‘plot1’
  rp.mururoa : mururoa.samp: no visible binding for global variable
  ‘plot1a’
  rp.mururoa : mururoa.samp: no visible binding for global variable
  ‘display.options’
  rp.mururoa : mururoa.samp: no visible binding for global variable
  ‘trend.setting’
  rp.mururoa : mururoa.samp: no visible binding for global variable
  ‘mururoa.true’
  rp.mururoa : mururoa.samp.redraw: no visible binding for global
  variable ‘plot1’
  rp.mururoa : mururoa.colour.chart.redraw: no visible binding for global
  variable ‘plot1a’
  rp.mururoa: no visible binding for global variable ‘plot1’
  rp.mururoa: no visible binding for global variable ‘stype’
  rp.mururoa: no visible binding for global variable ‘tsb’
  rp.mururoa: no visible binding for global variable ‘tsw’
  rp.mururoa: no visible binding for global variable ‘gx’
  rp.mururoa: no visible binding for global variable ‘gy’
  rp.mururoa: no visible binding for global variable ‘random.alignment’
  rp.mururoa: no visible binding for global variable ‘npts’
  rp.normal: no visible binding for global variable ‘curve.showing’
  rp.normal: no visible binding for global variable ‘stan’
  rp.normal: no visible binding for global variable ‘fitted.showing’
  rp.power: no visible binding for global variable ‘n’
  rp.power: no visible binding for global variable ‘mu1’
  rp.power: no visible binding for global variable ‘mu2’
  rp.power: no visible binding for global variable ‘sigma’
  rp.power: no visible binding for global variable ‘populations.showing’
  rp.regression : rp.regression1: no visible binding for global variable
  ‘intercept’
  rp.regression : rp.regression1: no visible binding for global variable
  ‘slope’
  rp.regression : rp.regression1: no visible binding for global variable
  ‘Display’
  rp.regression : rp.regression1: no visible binding for global variable
  ‘Influence’
  rp.regression2: no visible binding for global variable ‘theta’
  rp.regression2: no visible binding for global variable ‘phi’
  rp.rmplot: no visible binding for global variable ‘fac.showing’
  rp.rmplot: no visible binding for global variable ‘case.showing’
  rp.rmplot: no visible binding for global variable ‘case’
  rp.rmplot: no visible binding for global variable ‘data.range’
  rp.tables: no visible binding for global variable ‘distribution’
  rp.tables: no visible binding for global variable ‘degf1’
  rp.tables: no visible binding for global variable ‘degf2’
  rp.tables: no visible binding for global variable
  ‘observed.value.showing’
  rp.tables: no visible binding for global variable ‘xobs.prob’
  rp.tables: no visible binding for global variable ‘tail.area’
  rp.tables: no visible binding for global variable ‘tail.direction’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... NOTE
  
  Note: significantly better compression could be obtained
  by using R CMD build --resave-data
  old_size new_size compress
  sysdata.rda 455Kb 122Kb xz
• checking examples ... [1s/1s] OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/rpanel.Rcheck/00check.log’
  for details.