- using R Under development (unstable) (2012-08-11 r60235)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘pi0/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘pi0’ version ‘1.3-200’
- checking package namespace information ... OK
- checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘OCplus’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking whether package ‘pi0’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... WARNING
Found .Internal call in the following function:
‘dt.int2’
with calls to .Internal functions
‘dt’
Packages should not call .Internal(): it is not part of the API, for
use only by R itself and subject to change without notice.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... NOTE
Package(s) unavailable to check Rd xrefs: ‘OCplus’
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... ERROR
Running examples in ‘pi0-Ex.R’ failed
The error most likely occurred in:
> ### Name: znormix
> ### Title: Normal-mixture based estimation of LFDR and pi0
> ### Aliases: znormix
> ### Keywords: htest multivariate
>
> ### ** Examples
>
> set.seed(9992722)
> p=1-pnorm(c(rnorm(7000),rnorm(3000,1)))
> znormix(p, eps=1e-5)['pi0'] ## 0.6759555