- using R Under development (unstable) (2012-08-11 r60235)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- using options ‘--no-examples --no-tests --no-vignettes’
- checking for file ‘npRmpi/DESCRIPTION’ ... OK
- this is package ‘npRmpi’ version ‘0.40-13’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
demo/n_2/.Rprofile
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
- checking whether package ‘npRmpi’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... WARNING
Foreign function call(s) with ‘PACKAGE’ argument in different package:
.Call("r_init_sprng", ..., PACKAGE = "rsprng")
Undeclared package(s) in foreign function calls
‘rsprng’
See the chapter ‘System and foreign language interfaces’ of the
‘Writing R Extensions’ manual.
- checking R code for possible problems ... NOTE
.mpi.slave.apply: no visible binding for global variable ‘.comm’
.mpi.slave.applyLB: no visible binding for global variable ‘.comm’
.mpi.slave.exec: no visible binding for global variable ‘.comm’
.mpi.slave.exec: no visible binding for global variable ‘.mpi.err’
.mpi.slave.sim: no visible binding for global variable ‘.comm’
mpi.applyLB: no visible binding for global variable ‘.mpi.applyLB’
mpi.applyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
mpi.bcast.Robj2slave: no visible binding for global variable ‘.comm’
mpi.iapplyLB: no visible binding for global variable ‘.mpi.applyLB’
mpi.iapplyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
mpi.info.get: no visible binding for global variable ‘valulen’
mpi.info.get: no visible global function definition for ‘.as.integer’
mpi.init.sprng: no visible global function definition for ‘init.sprng’
mpi.init.sprng: no visible binding for global variable ‘.Sprng.seed’
mpi.parSim: no visible binding for '<<-' assignment to ‘.mpi.parSim’
mpi.parSim: no visible binding for global variable ‘.mpi.parSim’
mpi.parallel.sim: no visible binding for '<<-' assignment to
‘.mpi.parSim’
mpi.parallel.sim: no visible binding for global variable ‘.mpi.parSim’
mpi.scatter.Robj2slave: no visible binding for global variable ‘.comm’
mpi.setup.rngstream: no visible global function definition for
‘.lec.init’
mpi.setup.rngstream: no visible global function definition for
‘.lec.SetPackageSeed’
mpi.setup.rngstream: no visible global function definition for
‘.lec.CreateStream’
mpi.setup.rngstream: no visible binding for global variable
‘.lec.GetStateList’
mpi.setup.rngstream: no visible binding for '<<-' assignment to
‘.Rngstream.seed’
mpi.setup.rngstream : initRNGstreamNode: no visible binding for global
variable ‘.lec.Random.seed.table’
mpi.setup.rngstream : initRNGstreamNode: no visible binding for '<<-'
assignment to ‘.lec.Random.seed.table’
mpi.setup.rngstream : initRNGstreamNode: no visible global function
definition for ‘.lec.CurrentStream’
mpi.universe.size: no visible binding for global variable
‘.mpi.universe.size’
slave.hostinfo: no visible binding for global variable ‘.comm’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... SKIPPED
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/npRmpi.Rcheck/00check.log’
for details.