• using R Under development (unstable) (2012-05-19 r59366)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘gstat/DESCRIPTION’ ... OK
• this is package ‘gstat’ version ‘1.0-10’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘gstat’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [38s/38s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [39s/40s] OK
  Running ‘blockkr.R’ [1s/1s]
  Comparing ‘blockkr.Rout’ to ‘blockkr.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘covtable.R’ [1s/1s]
  Comparing ‘covtable.Rout’ to ‘covtable.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘cv.R’ [2s/2s]
  Comparing ‘cv.Rout’ to ‘cv.Rout.save’ ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  59,61d58
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  76,77c73,74
  < Median :5.767 Median :0.006181 Median :5.787 Median : 0.010332
  < Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007156
  ---
  > Median :5.767 Median :0.006181 Median :5.787 Median : 0.010331
  > Mean :5.893 Mean :0.006597 Mean :5.886 Mean :-0.007157
  81c78
  < Min. :-5.45653 Min. :1.000 Min. :178605 Min. :329714
  ---
  > Min. :-5.45652 Min. :1.000 Min. :178605 Min. :329714
  87,89d83
  < Warning message:
  < In checkNames(value) :
  < attempt to set invalid names: this may lead to problems later on. See ?make.names
  Running ‘cv3d.R’ [2s/2s]
  Comparing ‘cv3d.Rout’ to ‘cv3d.Rout.save’ ...11c11
  < as.Date, as.Date.numeric
  ---
  > as.Date
  20c20
  < 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85076
  ---
  > 3rd Qu.: 0.1614 3rd Qu.:0.2396 3rd Qu.: 0.5005 3rd Qu.: 0.85075
  23,28c23,28
  < Min. :-5.1678 Min. : 1.00 Min. :0.006784 Min. :0.003404
  < 1st Qu.:-1.8749 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  < Median : 0.2453 Median :25.50 Median :0.486683 Median :0.452500
  < Mean : 0.0167 Mean :25.50 Mean :0.499664 Mean :0.496887
  < 3rd Qu.: 2.0201 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  < Max. : 7.3541 Max. :50.00 Max. :0.987538 Max. :0.987169
  ---
  > Min. :-5.16777 Min. : 1.00 Min. :0.006784 Min. :0.003404
  > 1st Qu.:-1.87495 1st Qu.:13.25 1st Qu.:0.239662 1st Qu.:0.246573
  > Median : 0.24533 Median :25.50 Median :0.486684 Median :0.452500
  > Mean : 0.01669 Mean :25.50 Mean :0.499664 Mean :0.496887
  > 3rd Qu.: 2.02008 3rd Qu.:37.75 3rd Qu.:0.747297 3rd Qu.:0.739427
  > Max. : 7.35414 Max. :50.00 Max. :0.987539 Max. :0.987169
  Running ‘fit.R’ [1s/1s]
  Comparing ‘fit.Rout’ to ‘fit.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘krige0.R’ [13s/13s]
  Comparing ‘krige0.Rout’ to ‘krige0.Rout.save’ ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘line.R’ [2s/2s]
  Comparing ‘line.Rout’ to ‘line.Rout.save’ ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘merge.R’ [1s/1s]
  Comparing ‘merge.Rout’ to ‘merge.Rout.save’ ...15c15
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘na.action.R’ [1s/1s]
  Comparing ‘na.action.Rout’ to ‘na.action.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘rings.R’ [1s/2s]
  Comparing ‘rings.Rout’ to ‘rings.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘sim.R’ [1s/1s]
  Comparing ‘sim.Rout’ to ‘sim.Rout.save’ ...10c10
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘unproj.R’ [3s/3s]
  Comparing ‘unproj.Rout’ to ‘unproj.Rout.save’ ...6,7c6,7
  < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
  < Path to GDAL shared files: /usr/share/gdal/1.7
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  21c21
  < as.Date, as.Date.numeric
  ---
  > as.Date
  48,51c48,51
  < Spam version 0.29-1 (2012-05-05) is loaded.
  < Type 'help( Spam)' or 'demo( spam)' for a short introduction
  < and overview of this package.
  < Help for individual functions is also obtained by adding the
  ---
  > Package 'spam' is loaded. Spam version 0.27-0 (2011-08-17).
  > Type demo( spam) for some demos, help( Spam) for an overview
  > of this package.
  > Help for individual functions is optained by adding the
  58c58
  < backsolve, forwardsolve
  ---
  > backsolve, forwardsolve, norm
  Running ‘variogram.R’ [1s/1s]
  Comparing ‘variogram.Rout’ to ‘variogram.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘vdist.R’ [1s/1s]
  Comparing ‘vdist.Rout’ to ‘vdist.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  Running ‘windst.R’ [7s/7s]
  Comparing ‘windst.Rout’ to ‘windst.Rout.save’ ...9c9
  < as.Date, as.Date.numeric
  ---
  > as.Date
  24d23
  < There were 50 or more warnings (use warnings() to see the first 50)
  80,81c79,80
  < Loaded GDAL runtime: GDAL 1.7.3, released 2010/11/10
  < Path to GDAL shared files: /usr/share/gdal/1.7
  ---
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  84,87c83
  < Checking rgeos availability: FALSE
  < Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  < which has a restricted licence. It is disabled by default;
  < to enable gpclib, type gpclibPermit()
  ---
  > Checking rgeos availability: TRUE
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [18s/18s] OK
• checking re-building of vignette PDFs ... [19s/21s] OK
• checking PDF version of manual ... OK