• using R Under development (unstable) (2012-08-11 r60235)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘fractal/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘fractal’ version ‘1.1-1’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... NOTE
    Found the following hidden files and directories:
    .project
    These were most likely included in error. See section ‘Package
    structure’ in the ‘Writing R Extensions’ manual.
  • checking whether package ‘fractal’ can be installed ... OK
  • checking installed package size ... NOTE
    installed size is 6.5Mb
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... NOTE
    Foreign function call(s) with ‘PACKAGE’ argument in different package:
    .Call("RS_fractal_bootstrap_circulant_embedding", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_bootstrap_davison_hinkley", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_bootstrap_theiler", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_determinism_delta_epsilon", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_dimension_correlation_summation", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_dimension_false_nearest_neighbors", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_dimension_false_nearest_strands", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_dimension_information", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_embed", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_fdp_simulate", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_filter_median", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_filter_nonlinear_local_projection", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_kernel_density_estimate", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_local_lyapunov_spectrum", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_neighbor_find", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_poincare_map", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_space_time_separation_plot", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_stationarity_priestley_subba_rao", ..., PACKAGE = "ifultools")
    .Call("RS_fractal_time_delayed_mutual_information", ..., PACKAGE = "ifultools")
    See the chapter ‘System and foreign language interfaces’ of the
    ‘Writing R Extensions’ manual.
  • checking R code for possible problems ... NOTE
    FDSimulate : FDCirculantEmbedding: warning in lmModel("fdp", delta =
    delta, innov = innovations.var): partial argument match of 'innov' to
    'innovations.var'
    chaoticInvariant : <anonymous>: warning in linearFit(scale, x, fit =
    fit, angle = 5, aspect = FALSE, method = "widest"): partial argument
    match of 'angle' to 'angle.tolerance'
    chaoticInvariant : <anonymous>: warning in loess.smooth(x[good],
    scale[good], eval = length(x[good]), degree = 2): partial argument
    match of 'eval' to 'evaluation'
    chaoticInvariant : <anonymous>: warning in loess.smooth(scale[good],
    x[good], eval = length(x[good]), degree = 2): partial argument match
    of 'eval' to 'evaluation'
    lmSimulate : DHMgenSim: warning in complex(r = rn[2 * (1:(N - 1))], i =
    rn[2 * (1:(N - 1)) + 1]): partial argument match of 'r' to 'real'
    lmSimulate : DHMgenSim: warning in complex(r = rn[2 * (1:(N - 1))], i =
    rn[2 * (1:(N - 1)) + 1]): partial argument match of 'i' to
    'imaginary'
    surrogate: warning in SDF(x, recenter = TRUE, taper = h, method =
    "multitaper"): partial argument match of 'taper' to 'taper.'
    timeLag: warning in timeLag(x, method = "acfnadir", plot = FALSE):
    partial argument match of 'plot' to 'plot.data'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking R/sysdata.rda ... OK
  • checking examples ... [32s/32s] OK
  • checking PDF version of manual ... OK
    NOTE: There were 4 notes.
    See
    ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/fractal.Rcheck/00check.log’
    for details.