- using R Under development (unstable) (2012-05-19 r59366)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘elasticnet/DESCRIPTION’ ... OK
- this is package ‘elasticnet’ version ‘1.0-5’
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... WARNING
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
CRAN requires a NAMESPACE file for all submissions.
- checking for executable files ... OK
- checking whether package ‘elasticnet’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
plot.enet: warning in axis(4, at = coef1[nrow(coef1), ], label = vn,
cex = 0.8, adj = 0): partial argument match of 'label' to 'labels'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'plot.enet':
‘plot.enet’
S3 methods shown with full name in documentation object 'predict.enet':
‘predict.enet’
S3 methods shown with full name in documentation object 'print.arrayspc':
‘print.arrayspc’
S3 methods shown with full name in documentation object 'print.enet':
‘print.enet’
S3 methods shown with full name in documentation object 'print.spca':
‘print.spca’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... WARNING
Warning: large data file(s) saved inefficiently:
size ASCII compress
diabetes.RData 654Kb FALSE none
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
diabetes.RData 654Kb 152Kb xz
- checking examples ... [7s/7s] OK
- checking PDF version of manual ... OK
WARNING: There were 2 warnings.
NOTE: There were 2 notes.
See
‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/elasticnet.Rcheck/00check.log’
for details.