• using R Under development (unstable) (2012-08-11 r60235)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘TGUITeaching/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘TGUITeaching’ version ‘0.9.13’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
  CRAN requires a NAMESPACE file for all submissions.
• checking for executable files ... OK
• checking for hidden files and directories ... NOTE
  Found the following hidden files and directories:
  .project
  .settings
  These were most likely included in error. See section ‘Package
  structure’ in the ‘Writing R Extensions’ manual.
• checking whether package ‘TGUITeaching’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File ‘TGUITeaching/R/zzz.R’:
  .First.lib calls:
  cat("Start the GUI for the participants with runGUI()\n and the GUI for the course leader with adminGUI()\n")
  cat("The window of the R console should be minimized while using the GUI.\n")
  
  Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
  See section ‘Good practice’ in ?.onAttach.
  
  ex_BinomPlot : binom.refresh: warning in evalq(tclvalue(n), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_BinomPlot : binom.refresh: warning in evalq(tclvalue(p), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_BinomPlot : binom.refresh: warning in evalq(tclvalue(sn), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_BinomPlot : binom.refresh: warning in evalq(tclvalue(sp), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_Hists : hist.refresh: warning in evalq(tclvalue(maxx), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_Hists : hist.refresh: warning in evalq(tclvalue(minx), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_Hists : hist.refresh: warning in evalq(tclvalue(breaksMethod), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_QQPlots : plotInteractive3: warning in evalq(tclvalue(distr), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_QQPlots : plotInteractive3: warning in evalq(tclvalue(data), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_QQPlots : plotInteractive3: warning in evalq(tclvalue(n), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_boxplots : plotBoxplot: warning in evalq(tclvalue(choiceData), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_boxplots : plotBoxplot: warning in evalq(tclvalue(horiz), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_boxplots : plotBoxplot: warning in evalq(tclvalue(logar), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_clt : clt.examp: warning in evalq(tclvalue(nrSamples), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_clt : clt.examp: warning in evalq(tclvalue(nrDraws), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_clt : clt.examp: warning in evalq(tclvalue(nrClasses), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_clt : clt.examp: warning in evalq(tclvalue(userColor), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(aa), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(bb), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(cc), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(dd), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(diagonal),
  env = as.environment(which(search() == "TGUIenv"))): partial argument
  match of 'env' to 'envir'
  ex_eda : plotScatterplotMatrix: warning in evalq(tclvalue(smoothing),
  env = as.environment(which(search() == "TGUIenv"))): partial argument
  match of 'env' to 'envir'
  ex_timeseries : plotTS: warning in evalq(tclvalue(strata1), env =
  as.environment(which(search() == "TGUIenv"))): partial argument match
  of 'env' to 'envir'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... NONE
• checking PDF version of manual ... OK
  NOTE: There were 3 notes.
  See
  ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/TGUITeaching.Rcheck/00check.log’
  for details.