- using R Under development (unstable) (2012-05-19 r59366)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘Rmpi/DESCRIPTION’ ... OK
- this is package ‘Rmpi’ version ‘0.5-9’
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... WARNING
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
CRAN requires a NAMESPACE file for all submissions.
- checking for executable files ... OK
- checking whether package ‘Rmpi’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
.docall: warning in get(as.character(fun), env = .GlobalEnv, mode =
"function"): partial argument match of 'env' to 'envir'
.mpi.slave.apply: warning in assign(".mpi.err", FALSE, env =
.GlobalEnv): partial argument match of 'env' to 'envir'
.mpi.slave.applyLB: warning in assign(".mpi.err", FALSE, env =
.GlobalEnv): partial argument match of 'env' to 'envir'
.mpi.slave.exec: warning in assign(".mpi.err", FALSE, env =
.GlobalEnv): partial argument match of 'env' to 'envir'
mpi.bcast.Robj2slave: warning in assign(.tmpRobj$objname, .tmpRobj$obj,
env = .GlobalEnv): partial argument match of 'env' to 'envir'
mpi.init.sprng: warning in assign(".Sprng.seed", as.integer(c(seed,
kind, para)), env = .GlobalEnv): partial argument match of 'env' to
'envir'
mpi.init.sprng: warning in assign(".Sprng.seed", mpi.bcast(integer(3),
type = 1, rank = rank, comm = comm), env = .GlobalEnv): partial
argument match of 'env' to 'envir'
mpi.scatter.Robj2slave: warning in assign(.tmpname$objname, .tmpRobj,
env = .GlobalEnv): partial argument match of 'env' to 'envir'
mpi.setup.sprng: warning in assign(".Sprng.seed", as.integer(c(seed,
kind, para)), env = .GlobalEnv): partial argument match of 'env' to
'envir'
.mpi.slave.apply: no visible binding for global variable ‘.comm’
.mpi.slave.applyLB: no visible binding for global variable ‘.comm’
.mpi.slave.exec: no visible binding for global variable ‘.comm’
.mpi.slave.exec: no visible binding for global variable ‘.mpi.err’
.mpi.slave.sim: no visible binding for global variable ‘.comm’
mpi.applyLB: no visible binding for global variable ‘.mpi.applyLB’
mpi.applyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
mpi.bcast.Robj2slave: no visible binding for global variable ‘.comm’
mpi.iapplyLB: no visible binding for global variable ‘.mpi.applyLB’
mpi.iapplyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
mpi.info.get: no visible binding for global variable ‘valulen’
mpi.info.get: no visible global function definition for ‘.as.integer’
mpi.init.sprng: no visible binding for global variable ‘.Sprng.seed’
mpi.parSim: no visible binding for '<<-' assignment to ‘.mpi.parSim’
mpi.parSim: no visible binding for global variable ‘.mpi.parSim’
mpi.parallel.sim: no visible binding for '<<-' assignment to
‘.mpi.parSim’
mpi.parallel.sim: no visible binding for global variable ‘.mpi.parSim’
mpi.scatter.Robj2slave: no visible binding for global variable ‘.comm’
mpi.setup.rngstream: no visible binding for '<<-' assignment to
‘.Rngstream.seed’
mpi.universe.size: no visible binding for global variable
‘.mpi.universe.size’
slave.hostinfo: no visible binding for global variable ‘.comm’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... [0s/0s] OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There was 1 note.
See
‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/Rmpi.Rcheck/00check.log’
for details.