• using R Under development (unstable) (2012-05-19 r59366)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘Rmpi/DESCRIPTION’ ... OK
  • this is package ‘Rmpi’ version ‘0.5-9’
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... WARNING
    As from R 2.14.0 all packages need a namespace.
    One will be generated on installation, but it is better to handcraft a
    NAMESPACE file: R CMD build will produce a suitable starting point.
    CRAN requires a NAMESPACE file for all submissions.
  • checking for executable files ... OK
  • checking whether package ‘Rmpi’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    .docall: warning in get(as.character(fun), env = .GlobalEnv, mode =
    "function"): partial argument match of 'env' to 'envir'
    .mpi.slave.apply: warning in assign(".mpi.err", FALSE, env =
    .GlobalEnv): partial argument match of 'env' to 'envir'
    .mpi.slave.applyLB: warning in assign(".mpi.err", FALSE, env =
    .GlobalEnv): partial argument match of 'env' to 'envir'
    .mpi.slave.exec: warning in assign(".mpi.err", FALSE, env =
    .GlobalEnv): partial argument match of 'env' to 'envir'
    mpi.bcast.Robj2slave: warning in assign(.tmpRobj$objname, .tmpRobj$obj,
    env = .GlobalEnv): partial argument match of 'env' to 'envir'
    mpi.init.sprng: warning in assign(".Sprng.seed", as.integer(c(seed,
    kind, para)), env = .GlobalEnv): partial argument match of 'env' to
    'envir'
    mpi.init.sprng: warning in assign(".Sprng.seed", mpi.bcast(integer(3),
    type = 1, rank = rank, comm = comm), env = .GlobalEnv): partial
    argument match of 'env' to 'envir'
    mpi.scatter.Robj2slave: warning in assign(.tmpname$objname, .tmpRobj,
    env = .GlobalEnv): partial argument match of 'env' to 'envir'
    mpi.setup.sprng: warning in assign(".Sprng.seed", as.integer(c(seed,
    kind, para)), env = .GlobalEnv): partial argument match of 'env' to
    'envir'
    .mpi.slave.apply: no visible binding for global variable ‘.comm’
    .mpi.slave.applyLB: no visible binding for global variable ‘.comm’
    .mpi.slave.exec: no visible binding for global variable ‘.comm’
    .mpi.slave.exec: no visible binding for global variable ‘.mpi.err’
    .mpi.slave.sim: no visible binding for global variable ‘.comm’
    mpi.applyLB: no visible binding for global variable ‘.mpi.applyLB’
    mpi.applyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
    mpi.bcast.Robj2slave: no visible binding for global variable ‘.comm’
    mpi.iapplyLB: no visible binding for global variable ‘.mpi.applyLB’
    mpi.iapplyLB: no visible binding for '<<-' assignment to ‘.mpi.applyLB’
    mpi.info.get: no visible binding for global variable ‘valulen’
    mpi.info.get: no visible global function definition for ‘.as.integer’
    mpi.init.sprng: no visible binding for global variable ‘.Sprng.seed’
    mpi.parSim: no visible binding for '<<-' assignment to ‘.mpi.parSim’
    mpi.parSim: no visible binding for global variable ‘.mpi.parSim’
    mpi.parallel.sim: no visible binding for '<<-' assignment to
    ‘.mpi.parSim’
    mpi.parallel.sim: no visible binding for global variable ‘.mpi.parSim’
    mpi.scatter.Robj2slave: no visible binding for global variable ‘.comm’
    mpi.setup.rngstream: no visible binding for '<<-' assignment to
    ‘.Rngstream.seed’
    mpi.universe.size: no visible binding for global variable
    ‘.mpi.universe.size’
    slave.hostinfo: no visible binding for global variable ‘.comm’
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking examples ... [0s/0s] OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning.
    NOTE: There was 1 note.
    See
    ‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/Rmpi.Rcheck/00check.log’
    for details.