- using R Under development (unstable) (2012-08-11 r60235)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘RandForestGUI/DESCRIPTION’ ... OK
- this is package ‘RandForestGUI’ version ‘1.0’
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
CRAN requires a NAMESPACE file for all submissions.
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking whether package ‘RandForestGUI’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... WARNING
selection:
function(x, ...)
selection.RF:
function()
See section ‘Generic functions and methods’ of the ‘Writing R
Extensions’ manual.
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
Davies_Bouldin_URF : calc: warning in matrix(nc = 3, nr =
c(dim(mat.analyse.RF)[1] - 1)): partial argument match of 'nr' to
'nrow'
Davies_Bouldin_URF : calc: warning in matrix(nc = 3, nr =
c(dim(mat.analyse.RF)[1] - 1)): partial argument match of 'nc' to
'ncol'
RISA2RF.RF : importGUI3 : mm: warning in read.table(file = fil,
colClasses = "character", dec = dec, sep = sep, h = heac): partial
argument match of 'h' to 'header'
RISA2RF.RF : importGUI3 : mm: warning in matrix(nr = dim(m)[1], nc =
dim(m)[2]): partial argument match of 'nr' to 'nrow'
RISA2RF.RF : importGUI3 : mm: warning in matrix(nr = dim(m)[1], nc =
dim(m)[2]): partial argument match of 'nc' to 'ncol'
URF_tune_mtry : URF_tune_mtry_temp: warning in matrix(nr = length(val),
nc = 5): partial argument match of 'nr' to 'nrow'
URF_tune_mtry : URF_tune_mtry_temp: warning in matrix(nr = length(val),
nc = 5): partial argument match of 'nc' to 'ncol'
mds.RF : plot_mds: warning in round(URF_temp_mds$stress, digit = 4):
partial argument match of 'digit' to 'digits'
mds.URF : plot_mds.temp: warning in round(URF_mds$stress, digit = 4):
partial argument match of 'digit' to 'digits'
mds.fitted.RF : plot_mds.RF.tempp: warning in
round(URF_temp_mds$stress, digit = 4): partial argument match of
'digit' to 'digits'
new.SRF.OOB : temp: warning in matrix(nc = length(levels(factt)) * 2,
nr = length(probee)): partial argument match of 'nr' to 'nrow'
new.SRF.OOB : temp: warning in matrix(nc = length(levels(factt)) * 2,
nr = length(probee)): partial argument match of 'nc' to 'ncol'
new.SRF.OOB : temp: warning in matrix(nc = nbfor.temp, nr = c(min - max
+ 1)): partial argument match of 'nr' to 'nrow'
new.SRF.OOB : temp: warning in matrix(nc = nbfor.temp, nr = c(min - max
+ 1)): partial argument match of 'nc' to 'ncol'
new.SRF.OOB.aff : temp: warning in matrix(nc =
decrease_nb_var_nbfor_aff, nr = c(min - max + 1)): partial argument
match of 'nr' to 'nrow'
new.SRF.OOB.aff : temp: warning in matrix(nc =
decrease_nb_var_nbfor_aff, nr = c(min - max + 1)): partial argument
match of 'nc' to 'ncol'
perm.MDA.init : temp: warning in matrix(nr = perm.number, nc =
dim(mat.analyse.RF)[2]): partial argument match of 'nr' to 'nrow'
perm.MDA.init : temp: warning in matrix(nr = perm.number, nc =
dim(mat.analyse.RF)[2]): partial argument match of 'nc' to 'ncol'
plot_univ : tablee: warning in matrix(nc = length(levels(factt)) * 2,
nr = length(probee)): partial argument match of 'nr' to 'nrow'
plot_univ : tablee: warning in matrix(nc = length(levels(factt)) * 2,
nr = length(probee)): partial argument match of 'nc' to 'ncol'
plot_univ : circleplot: warning in round(decostand(mat.analyse.RF[,
which(colnames(mat.analyse.RF) == n)], method = "range") * 5, digit =
1): partial argument match of 'digit' to 'digits'
plot_univ : domm: warning in matrix(nc = length(levels(factt)), nr =
length(probee)): partial argument match of 'nr' to 'nrow'
plot_univ : domm: warning in matrix(nc = length(levels(factt)), nr =
length(probee)): partial argument match of 'nc' to 'ncol'
plot_univ : domm: warning in round(val[j, i]/max(val[j, -i]), digit =
2): partial argument match of 'digit' to 'digits'
tk_select: warning in round(URF_mds$stress, digit = 4): partial
argument match of 'digit' to 'digits'
tk_select: warning in round(SRF_ini_OOB, digit = 4): partial argument
match of 'digit' to 'digits'
tk_select: warning in round(SRF_ini_mds$stress, digit = 4): partial
argument match of 'digit' to 'digits'
tk_select: warning in round(SRF_ini_OOB_fitted, digit = 4): partial
argument match of 'digit' to 'digits'
tk_select: warning in round(correlation[1], digit = 4): partial
argument match of 'digit' to 'digits'
tk_select: warning in round(SRF_fitted_mds$stress, digit = 4): partial
argument match of 'digit' to 'digits'
Davies_Bouldin_URF : calc: no visible binding for global variable
‘mat.analyse.RF’
Davies_Bouldin_URF : calc: no visible binding for global variable
‘URF_mean’
Davies_Bouldin_URF : calc: no visible binding for '<<-' assignment to
‘DB_index’
Davies_Bouldin_URF : plott: no visible binding for global variable
‘DB_index’
Davies_Bouldin_URF: no visible binding for '<<-' assignment to ‘nff1’
Davies_Bouldin_URF: no visible binding for global variable ‘nf’
Davies_Bouldin_URF: no visible binding for global variable ‘nff1’
MDA.RF : temp: no visible binding for '<<-' assignment to ‘cond’
MDA.RF : temp: no visible binding for global variable ‘nf’
MDA.RF : temp: no visible binding for '<<-' assignment to
‘MDA_conditional’
MDA.RF : temp: no visible binding for global variable ‘cond’
MDA.RF : temp: no visible binding for global variable ‘filename.RF’
MDA.RF : temp: no visible binding for global variable ‘SRF_ini’
MDA.RF : temp: no visible binding for global variable ‘mat.analyse.RF’
MDA.RF : temp: no visible binding for global variable ‘MDA_conditional’
MDA.RF : temp: no visible binding for '<<-' assignment to
‘SRF_ini_myvarimp_selected’
MDA.RF: no visible binding for global variable ‘nf’
MDA.RF: no visible binding for global variable ‘SRF_ini_myvarimp’
MDA.RF: no visible binding for global variable ‘MDA_conditional’
OOB.RF: no visible binding for global variable ‘SRF_ini_dat’
OOB.RF: no visible binding for global variable ‘SRF_ini’
OOB.RF: no visible binding for '<<-' assignment to ‘SRF_ini_OOB’
OOB.RF.fitted: no visible binding for global variable
‘SRF_ini_dat_fitted’
OOB.RF.fitted: no visible binding for global variable ‘SRF_ini_fitted’
OOB.RF.fitted: no visible binding for '<<-' assignment to
‘SRF_ini_OOB_fitted’
RISA2RF.RF : RISA2RF.RF_temp: no visible binding for '<<-' assignment
to ‘none’
RISA2RF.RF : RISA2RF.RF_temp: no visible binding for '<<-' assignment
to ‘aaa’
RISA2RF.RF : RISA2RF.RF_temp: no visible binding for global variable
‘aaa’
RISA2RF.RF : RISA2RF.RF_temp : ess: no visible binding for global
variable ‘aaa’
RISA2RF.RF : RISA2RF.RF_temp : ess: no visible binding for '<<-'
assignment to ‘mat.analyse.RF.init’
RISA2RF.RF : RISA2RF.RF_temp : ess: no visible binding for global
variable ‘nb’
RISA2RF.RF : importGUI3: no visible binding for global variable
‘Filters’
RISA2RF.RF : importGUI3 : mm: no visible binding for '<<-' assignment
to ‘mat.analyse.RF.init’
RISA2RF.RF : importGUI3 : mm: no visible binding for '<<-' assignment
to ‘mat.analyse.RF’
RISA2RF.RF: no visible binding for global variable ‘nf’
RandForestGUI: no visible binding for '<<-' assignment to
‘colo_fig_par’
RandForestGUI: no visible binding for global variable ‘curlang’
RandForestGUI: no visible binding for global variable ‘mem_lim’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘mat.analyse.RF.fitted’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_fin_tunemtry_inc’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for '<<-'
assignment to ‘dat’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘fact.temp’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for '<<-'
assignment to ‘fff’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘fff’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_fit_tunemtry_nbforest’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_fin_tunemtry_nbtree’
SRF.fin.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘dat’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘fact.RF’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘fact.temp’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘nf’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_fit_tunemtry_nbforest’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘nbtree.temp’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_fin_tunemtry_nbtree’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘nbtree.temp’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_fin_tunemtry_inc’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘mat.analyse.RF.fitted’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘SRF_fin_tunemtry_inc’
SRF.fin.tune.mtryGUI : temp: no visible binding for global variable
‘SRF_fit_tunemtry_nbforest’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘fff’
SRF.fin.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_fit_tunemtry_restree’
SRF.fin.tune.mtryGUI: no visible binding for global variable ‘nf’
SRF.fin.tune.mtryGUI: no visible binding for global variable
‘SRF_ini_mtry_fitted’
SRF.fin.tune.mtryGUI: no visible binding for global variable
‘mat.analyse.RF.fitted’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘mat.analyse.RF’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_ini_tunemtry_inc’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for '<<-'
assignment to ‘dat’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘fact.temp’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for '<<-'
assignment to ‘fff’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘fff’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_ini_tunemtry_nbforest’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘SRF_ini_tunemtry_nbtree’
SRF.tune.mtryGUI : temp : bestmtry: no visible binding for global
variable ‘dat’
SRF.tune.mtryGUI : temp: no visible binding for global variable
‘fact.RF’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘fact.temp’
SRF.tune.mtryGUI : temp: no visible binding for global variable ‘nf’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tunemtry_nbforest’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘nbtree.temp’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tunemtry_nbtree’
SRF.tune.mtryGUI : temp: no visible binding for global variable
‘nbtree.temp’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tunemtry_inc’
SRF.tune.mtryGUI : temp: no visible binding for global variable
‘mat.analyse.RF’
SRF.tune.mtryGUI : temp: no visible binding for global variable
‘SRF_ini_tunemtry_inc’
SRF.tune.mtryGUI : temp: no visible binding for global variable
‘SRF_ini_tunemtry_nbforest’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘fff’
SRF.tune.mtryGUI : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tunemtry_restree’
SRF.tune.mtryGUI: no visible binding for global variable ‘nf’
SRF.tune.mtryGUI: no visible binding for global variable ‘SRF_ini_mtry’
SRF.tune.mtryGUI: no visible binding for global variable
‘mat.analyse.RF’
SRF_fitted_rpart: no visible binding for global variable ‘fact.RF’
SRF_fitted_rpart: no visible binding for global variable ‘nf’
SRF_fitted_rpart: no visible binding for '<<-' assignment to
‘ctree_fitted_pval’
SRF_fitted_rpart : temp: no visible binding for global variable
‘mat.analyse.RF.fitted’
SRF_fitted_rpart : temp: no visible binding for global variable
‘fact.RF’
SRF_fitted_rpart : temp: no visible binding for global variable
‘ctree_fitted_pval’
SRF_init_VarImp: no visible binding for '<<-' assignment to ‘af’
SRF_init_VarImp : go: no visible binding for '<<-' assignment to
‘pval.threshold’
SRF_init_VarImp : go: no visible binding for global variable ‘nf’
SRF_init_VarImp : go: no visible binding for '<<-' assignment to ‘inf’
SRF_init_VarImp : go: no visible binding for global variable
‘pval.init’
SRF_init_VarImp : go: no visible binding for global variable
‘pval.threshold’
SRF_init_VarImp : go: no visible binding for global variable ‘inf’
SRF_init_VarImp : go: no visible binding for '<<-' assignment to ‘af’
SRF_init_VarImp : go: no visible binding for global variable ‘af’
SRF_init_VarImp: no visible binding for global variable ‘af’
SRF_init_VarImp: no visible binding for global variable ‘inf’
SRF_init_VarImp: no visible binding for global variable
‘mat.analyse.RF’
SRF_init_VarImp: no visible binding for '<<-' assignment to
‘mat.analyse.RF’
SRF_init_rpart: no visible binding for global variable ‘fact.RF’
SRF_init_rpart: no visible binding for global variable ‘nf’
SRF_init_rpart: no visible binding for '<<-' assignment to
‘ctree_ini_pval’
SRF_init_rpart: no visible binding for global variable ‘mat.analyse.RF’
SRF_init_rpart: no visible binding for global variable ‘ctree_ini_pval’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for global
variable ‘mat.analyse.RF’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for global
variable ‘nf’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for '<<-'
assignment to ‘URF_tune_mtry_incr’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for '<<-'
assignment to ‘URF_tune_mtry_forest’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for '<<-'
assignment to ‘URF_tune_mtry_nbtree’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for global
variable ‘URF_meth’
URF_tune_mtry : URF_tune_mtry_temp: no visible binding for global
variable ‘nb’
URF_tune_mtry : plot_tune_mtry: no visible binding for global variable
‘URF_mtry’
URF_tune_mtry: no visible binding for global variable ‘nf’
choiceGUI: no visible binding for global variable ‘nf’
choicefactGUI: no visible binding for global variable ‘nf’
cluster_det_URF: no visible binding for global variable ‘DB_index’
cluster_det_URF: no visible binding for '<<-' assignment to
‘cluster_algo’
cluster_det_URF: no visible binding for global variable ‘nf’
cluster_det_URF: no visible binding for global variable ‘cluster_algo’
cluster_det_URF: no visible binding for '<<-' assignment to
‘nb_clust_URF’
cluster_det_URF: no visible binding for '<<-' assignment to ‘factt’
cluster_det_URF: no visible binding for '<<-' assignment to ‘clust_URF’
cluster_det_URF: no visible binding for global variable ‘URF_mean’
cluster_det_URF: no visible binding for global variable ‘nb_clust_URF’
cluster_det_URF: no visible binding for global variable ‘URF_mds’
cluster_det_URF: no visible binding for global variable ‘clust_URF’
cluster_det_URF: no visible binding for global variable ‘factt’
cluster_det_URF: no visible binding for global variable ‘nb’
correlation.RF.init.vs.fitted: no visible binding for global variable
‘SRF.init.prox.raw’
correlation.RF.init.vs.fitted: no visible binding for global variable
‘SRF.fitted.prox.raw’
correlation.RF.init.vs.fitted: no visible binding for global variable
‘mat.analyse.RF’
correlation.RF.init.vs.fitted: no visible binding for global variable
‘mat.analyse.RF.fitted’
correlation.RF.init.vs.fitted: no visible binding for '<<-' assignment
to ‘correlation’
diversity.calc.RF : diversity.calc: no visible binding for global
variable ‘mat.analyse.RF’
diversity.calc.RF: no visible binding for global variable ‘nf’
fig_par: no visible binding for global variable ‘nf’
fig_par: no visible binding for '<<-' assignment to ‘colo_fig_par’
fig_par: no visible binding for global variable ‘colo_fig_par’
graphfact.RF: no visible binding for global variable ‘diversity.RF’
graphfact.RF: no visible binding for global variable ‘fact.RF’
heat.mapGUI.RF : compute.heatmap : newdist: no visible global function
definition for ‘dsvdis’
heat.mapGUI.RF : compute.heatmap: no visible binding for global
variable ‘nf’
heat.mapGUI.RF : compute.heatmap: no visible binding for global
variable ‘factt’
import_variable.RF : import_variable.RF_temp : import.file: no visible
binding for global variable ‘mat.analyse.RF’
import_variable.RF : import_variable.RF_Robject: no visible binding for
'<<-' assignment to ‘none’
import_variable.RF : import_variable.RF_Robject: no visible binding for
'<<-' assignment to ‘aaa’
import_variable.RF : import_variable.RF_Robject: no visible binding for
global variable ‘aaa’
import_variable.RF : import_variable.RF_Robject : ess: no visible
binding for global variable ‘aaa’
import_variable.RF : import_variable.RF_Robject : ess: no visible
binding for global variable ‘nb’
import_variable.RF: no visible binding for global variable ‘nf’
language.RF: no visible binding for global variable ‘nf’
loadGUI.RF: no visible binding for global variable ‘filename.RF’
mds.RF : temp: no visible binding for global variable ‘nf’
mds.RF : temp: no visible binding for '<<-' assignment to
‘SRF_init_mds.type’
mds.RF : temp: no visible binding for global variable
‘SRF_init_mds.type’
mds.RF : temp: no visible binding for '<<-' assignment to
‘SRF_init_nbperm’
mds.RF : temp : best.nmds: no visible binding for global variable
‘SRF_init_mds.type’
mds.RF : temp: no visible binding for global variable
‘SRF.init.prox.raw’
mds.RF : temp: no visible binding for global variable ‘SRF_init_nbperm’
mds.RF : temp: no visible binding for global variable ‘URF_mds.type’
mds.RF : heatmap.temp: no visible binding for global variable ‘fact.RF’
mds.RF : heatmap.temp: no visible binding for '<<-' assignment to ‘nf3’
mds.RF : heatmap.temp: no visible binding for global variable ‘nf’
mds.RF : heatmap.temp: no visible binding for '<<-' assignment to
‘factt’
mds.RF : heatmap.temp: no visible binding for global variable
‘SRF.init.prox.raw’
mds.RF : heatmap.temp: no visible binding for global variable
‘mat.analyse.RF’
mds.RF : heatmap.temp: no visible binding for global variable ‘factt’
mds.RF : heatmap.temp: no visible binding for '<<-' assignment to
‘tree_algo’
mds.RF : heatmap.temp: no visible binding for global variable
‘tree_algo’
mds.RF : heatmap.temp: no visible binding for global variable ‘nf3’
mds.RF : plot_mds: no visible binding for global variable ‘SRF_ini_mds’
mds.RF : plot_mds: no visible binding for global variable ‘fact.RF’
mds.RF : plot_mds: no visible binding for '<<-' assignment to ‘factt’
mds.RF : plot_mds: no visible binding for global variable ‘nf’
mds.RF : plot_mds: no visible binding for global variable
‘SRF_init_mds.type’
mds.RF : plot_mds: no visible binding for global variable
‘fact.supRF.init’
mds.RF : plot_mds: no visible binding for global variable
‘SRF_init_nbperm’
mds.RF : plot_mds: no visible binding for global variable ‘factt’
mds.RF: no visible binding for '<<-' assignment to ‘nf1’
mds.RF: no visible binding for global variable ‘nf’
mds.RF: no visible binding for global variable ‘nf1’
mds.URF : temp: no visible binding for global variable ‘nf’
mds.URF : temp: no visible binding for '<<-' assignment to
‘URF_mds.type’
mds.URF : temp: no visible binding for global variable ‘URF_mds.type’
mds.URF : temp: no visible binding for '<<-' assignment to
‘URF_mds_nbperm’
mds.URF : temp : best.nmds: no visible binding for global variable
‘URF_mds.type’
mds.URF : temp: no visible binding for global variable ‘URF_mean’
mds.URF : temp: no visible binding for global variable ‘URF_mds_nbperm’
mds.URF : heatmap.temp: no visible binding for global variable
‘fact.RF’
mds.URF : heatmap.temp: no visible binding for '<<-' assignment to
‘nf3’
mds.URF : heatmap.temp: no visible binding for global variable ‘nf’
mds.URF : heatmap.temp: no visible binding for '<<-' assignment to
‘factt’
mds.URF : heatmap.temp: no visible binding for global variable
‘URF_mean’
mds.URF : heatmap.temp: no visible binding for global variable
‘mat.analyse.RF’
mds.URF : heatmap.temp: no visible binding for global variable
‘SRF_ini_myvarimp’
mds.URF : heatmap.temp: no visible binding for global variable ‘factt’
mds.URF : heatmap.temp: no visible binding for '<<-' assignment to
‘tree_algo’
mds.URF : heatmap.temp: no visible binding for global variable
‘tree_algo’
mds.URF : heatmap.temp: no visible binding for global variable ‘nf3’
mds.URF : plot_mds.temp: no visible binding for global variable
‘fact.RF’
mds.URF : plot_mds.temp: no visible binding for '<<-' assignment to
‘factt’
mds.URF : plot_mds.temp: no visible binding for global variable ‘nf’
mds.URF : plot_mds.temp: no visible binding for global variable
‘URF_mds’
mds.URF : plot_mds.temp: no visible binding for global variable
‘URF_mds.type’
mds.URF : plot_mds.temp: no visible binding for global variable
‘URF_meth’
mds.URF : plot_mds.temp: no visible binding for global variable
‘URF_mds_nbperm’
mds.URF : plot_mds.temp: no visible binding for global variable ‘factt’
mds.URF: no visible binding for '<<-' assignment to ‘nff2’
mds.URF: no visible binding for global variable ‘nf’
mds.URF: no visible binding for global variable ‘nff2’
mds.fitted.RF : temp: no visible binding for global variable ‘nf’
mds.fitted.RF : temp: no visible binding for '<<-' assignment to
‘SRF_fitted_mds.type’
mds.fitted.RF : temp: no visible binding for global variable
‘SRF_fitted_mds.type’
mds.fitted.RF : temp: no visible binding for '<<-' assignment to
‘SRF_fitted_nbperm’
mds.fitted.RF : temp : best.nmds: no visible binding for global
variable ‘SRF_fitted_mds.type’
mds.fitted.RF : temp: no visible binding for global variable
‘SRF.fitted.prox.raw’
mds.fitted.RF : temp: no visible binding for global variable
‘SRF_fitted_nbperm’
mds.fitted.RF : temp: no visible binding for global variable
‘URF_mds.type’
mds.fitted.RF : temp: no visible binding for '<<-' assignment to
‘SRF_fitted_mds.typee’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘SRF.fitted.prox.raw’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘mat.analyse.RF.fitted’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘SRF_ini_myvarimp_selected’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘fact.RF’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘fact.supRF.fitted’
mds.fitted.RF : heatmap.temp: no visible binding for '<<-' assignment
to ‘tree_algo_fitted’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘nf’
mds.fitted.RF : heatmap.temp: no visible binding for global variable
‘tree_algo_fitted’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for '<<-'
assignment to ‘URF_temp_mds’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘SRF_fitted_mds’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘fact.RF’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for '<<-'
assignment to ‘factt’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘nf’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘URF_temp_mds’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘SRF_fitted_mds.type’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘fact.supRF.init’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘SRF_ini_myvarimp_selected’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘SRF_fitted_nbperm’
mds.fitted.RF : plot_mds.RF.tempp: no visible binding for global
variable ‘factt’
mds.fitted.RF: no visible binding for '<<-' assignment to ‘nf6’
mds.fitted.RF: no visible binding for global variable ‘nf’
mds.fitted.RF: no visible binding for global variable ‘nf6’
memory.increase: no visible binding for global variable ‘nf’
memory.increase: no visible binding for '<<-' assignment to ‘mem_lim’
misclassification_ini: no visible binding for global variable
‘filename.RF’
misclassification_ini: no visible binding for global variable
‘SRF_ini_dat’
misclassification_ini: no visible binding for global variable ‘SRF_ini’
misclassification_ini: no visible binding for global variable
‘SRF_ini_dat_fitted’
misclassification_ini: no visible binding for global variable
‘SRF_ini_fitted’
new.SRF.OOB : temp: no visible binding for global variable ‘fact.RF’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘fact.temp’
new.SRF.OOB : temp: no visible binding for global variable ‘nf’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘nbfor.temp’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘nbtree.temp’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘decrease_nb_var_nbtree’
new.SRF.OOB : temp: no visible binding for global variable
‘nbtree.temp’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘numb_temp_min’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘numb_temp_max’
new.SRF.OOB : temp: no visible binding for global variable
‘mat.analyse.RF’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to ‘probee’
new.SRF.OOB : temp: no visible binding for global variable ‘fact.temp’
new.SRF.OOB : temp: no visible binding for global variable ‘probee’
new.SRF.OOB : temp: no visible binding for global variable
‘numb_temp_max’
new.SRF.OOB : temp: no visible binding for global variable
‘numb_temp_min’
new.SRF.OOB : temp: no visible binding for global variable ‘nbfor.temp’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to ‘zir’
new.SRF.OOB : temp: no visible binding for global variable ‘zir’
new.SRF.OOB : temp: no visible binding for global variable
‘decrease_nb_var_nbtree’
new.SRF.OOB : temp: no visible binding for global variable
‘SRF.init.prox.raw’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘finnal1’
new.SRF.OOB : temp: no visible binding for '<<-' assignment to
‘finnal_cor1’
new.SRF.OOB : temp: no visible binding for global variable ‘finnal1’
new.SRF.OOB : temp: no visible binding for global variable
‘finnal_cor1’
new.SRF.OOB: no visible binding for '<<-' assignment to ‘nf5’
new.SRF.OOB: no visible binding for global variable ‘nf’
new.SRF.OOB: no visible binding for global variable ‘nf5’
new.SRF.OOB: no visible binding for global variable
‘SRF_ini_tune_nb_var’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘fact.RF’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘fact.temp’
new.SRF.OOB.aff : temp: no visible binding for global variable ‘nf’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘nbfor.temp’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘decrease_nb_var_nbfor_aff’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘nbfor.temp’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘nbtree.temp’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘decrease_nb_var_nbtree_aff’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘nbtree.temp’
new.SRF.OOB.aff : temp : plot.adjust.numb.var1: no visible binding for
global variable ‘SRF_ini_tune_nb_var’
new.SRF.OOB.aff : temp : plot.adjust.numb.var1: no visible binding for
'<<-' assignment to ‘numb_temp’
new.SRF.OOB.aff : temp : plot.adjust.numb.var1: no visible binding for
global variable ‘nf’
new.SRF.OOB.aff : temp : plot.adjust.numb.var2: no visible binding for
global variable ‘SRF_ini_tune_nb_var’
new.SRF.OOB.aff : temp : plot.adjust.numb.var2: no visible binding for
global variable ‘numb_temp_min’
new.SRF.OOB.aff : temp : plot.adjust.numb.var2: no visible binding for
'<<-' assignment to ‘numb_temp’
new.SRF.OOB.aff : temp : plot.adjust.numb.var2: no visible binding for
global variable ‘nf’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘numb_temp_min’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘numb_temp’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘numb_temp_max’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘mat.analyse.RF’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘numb_temp_max’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘numb_temp_min’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘decrease_nb_var_nbfor_aff’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘zir’
new.SRF.OOB.aff : temp: no visible binding for global variable ‘zir’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘fact.temp’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘decrease_nb_var_nbtree_aff’
new.SRF.OOB.aff : temp: no visible binding for global variable
‘SRF.init.prox.raw’
new.SRF.OOB.aff : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tune_nb_var_aff_maxmin’
new.SRF.OOB.aff : plot_temp: no visible binding for global variable
‘SRF_ini_tune_nb_var’
new.SRF.OOB.aff : plot_temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff’
new.SRF.OOB.aff : plot_temp: no visible binding for global variable
‘SRF_ini_myvarimp’
new.SRF.OOB.aff : plot_temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff_maxmin’
new.SRF.OOB.aff : plot_temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff_cor’
new.SRF.OOB.aff: no visible binding for '<<-' assignment to ‘nf4’
new.SRF.OOB.aff: no visible binding for global variable ‘nf’
new.SRF.OOB.aff: no visible binding for global variable ‘nf4’
perm.MDA.init : temp: no visible binding for global variable ‘fact.RF’
perm.MDA.init : temp: no visible binding for global variable ‘nf’
perm.MDA.init : temp: no visible binding for '<<-' assignment to
‘perm.number’
perm.MDA.init : temp: no visible binding for '<<-' assignment to
‘perm.nbtree.temp’
perm.MDA.init : temp: no visible binding for global variable
‘perm.nbtree.temp’
perm.MDA.init : temp: no visible binding for global variable
‘mat.analyse.RF’
perm.MDA.init : temp: no visible binding for global variable
‘perm.number’
perm.MDA.init : temp: no visible binding for global variable
‘SRF_ini_myvarimp’
perm.MDA.init: no visible binding for global variable ‘nf’
perm.MDA.init: no visible binding for global variable ‘pval.init’
plot_adjust.numb.var : temp: no visible binding for global variable
‘SRF_ini_tune_nb_var’
plot_adjust.numb.var : temp: no visible binding for global variable
‘SRF_ini_myvarimp’
plot_adjust.numb.var : temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff_maxmin’
plot_adjust.numb.var : temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff_cor’
plot_adjust.numb.var : temp: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff’
plot_adjust.numb.var : temp: no visible binding for '<<-' assignment to
‘numb_temp’
plot_adjust.numb.var : temp: no visible binding for global variable
‘nf’
plot_adjust.numb.var : temp: no visible binding for global variable
‘numb_temp’
plot_adjust.numb.var : temp: no visible binding for '<<-' assignment to
‘SRF_ini_tune_nb_var_selected’
plot_adjust.numb.var : temp: no visible binding for global variable
‘mat.analyse.RF’
plot_adjust.numb.var: no visible binding for '<<-' assignment to ‘nff4’
plot_adjust.numb.var: no visible binding for global variable ‘nf’
plot_adjust.numb.var: no visible binding for global variable ‘nff4’
plot_univ : tablee: no visible binding for '<<-' assignment to ‘probee’
plot_univ : tablee: no visible binding for global variable
‘SRF_ini_myvarimp_selected’
plot_univ : tablee: no visible binding for global variable ‘factt’
plot_univ : tablee: no visible binding for global variable ‘probee’
plot_univ : tablee: no visible binding for global variable
‘mat.analyse.RF.fitted’
plot_univ : tablee: no visible binding for '<<-' assignment to
‘SRF_ini_mean_probe’
plot_univ : tablee: no visible binding for global variable ‘fact.RF’
plot_univ : tablee: no visible binding for global variable ‘nf7’
plot_univ : tablee: no visible binding for global variable
‘SRF_ini_mean_probe’
plot_univ : barplott: no visible binding for global variable
‘SRF_ini_mean_probe’
plot_univ : barplott: no visible binding for global variable ‘factt’
plot_univ : barplott: no visible binding for global variable
‘mat.analyse.RF.fitted’
plot_univ : circleplot: no visible binding for global variable ‘probee’
plot_univ : circleplot: no visible binding for global variable
‘mat.analyse.RF’
plot_univ : circleplot: no visible binding for global variable
‘SRF_fitted_mds’
plot_univ : circleplot: no visible binding for global variable ‘factt’
plot_univ : meansd: no visible binding for global variable
‘mat.analyse.RF’
plot_univ : meansd: no visible binding for global variable ‘factt’
plot_univ : meansd: no visible binding for global variable ‘probee’
plot_univ : meansd: no visible binding for global variable ‘fact.RF’
plot_univ : meansd: no visible binding for global variable ‘nf7’
plot_univ : domm: no visible binding for '<<-' assignment to ‘probee’
plot_univ : domm: no visible binding for global variable
‘SRF_ini_myvarimp_selected’
plot_univ : domm: no visible binding for global variable ‘factt’
plot_univ : domm: no visible binding for global variable ‘probee’
plot_univ : domm: no visible binding for global variable
‘mat.analyse.RF.fitted’
plot_univ: no visible binding for global variable ‘fact.RF’
plot_univ: no visible binding for '<<-' assignment to ‘nf7’
plot_univ: no visible binding for global variable ‘nf’
plot_univ: no visible binding for '<<-' assignment to ‘factt’
selection.RF : deletefactGUI.RF : select.factor: no visible binding for
global variable ‘fact.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level: no
visible binding for global variable ‘fact.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level: no
visible binding for global variable ‘ae’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : delete.selected: no visible binding for global
variable ‘ae’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : delete.selected: no visible binding for '<<-'
assignment to ‘mat.analyse.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : delete.selected: no visible binding for global
variable ‘mat.analyse.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : delete.selected: no visible binding for '<<-'
assignment to ‘param.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : delete.selected: no visible binding for global
variable ‘param.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : keep.selected: no visible binding for global variable
‘ae’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : keep.selected: no visible binding for '<<-'
assignment to ‘mat.analyse.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : keep.selected: no visible binding for global variable
‘mat.analyse.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : keep.selected: no visible binding for '<<-'
assignment to ‘param.RF’
selection.RF : deletefactGUI.RF : select.factor : select.level :
window.factor : keep.selected: no visible binding for global variable
‘param.RF’
selection.RF : deletefactGUI.RF : select.factor : window.level: no
visible binding for '<<-' assignment to ‘ae’
selection.RF : deselect.RF: no visible binding for '<<-' assignment to
‘mat.analyse.RF’
selection.RF : deselect.RF: no visible binding for global variable
‘mat.analyse.RF.init’
selection.RF : deselect.RF: no visible binding for '<<-' assignment to
‘fact.RF’
selection.RF : deselect.RF: no visible binding for global variable
‘fact.RF.init’
selection.RF : deselect.RF: no visible binding for '<<-' assignment to
‘param.RF’
selection.RF : deselect.RF: no visible binding for global variable
‘param.RF.init’
selection.RF: no visible binding for global variable ‘nf’
several_URF : several_URF_temp : bestforest: no visible binding for
global variable ‘mat.analyse.RF’
several_URF : several_URF_temp : bestforest: no visible binding for
global variable ‘URF_meth’
several_URF : several_URF_temp : bestforest: no visible binding for
'<<-' assignment to ‘datRFsyn’
several_URF : several_URF_temp : bestforest: no visible binding for
global variable ‘URF_nbtree’
several_URF : several_URF_temp : bestforest: no visible binding for
global variable ‘datRFsyn’
several_URF : several_URF_temp: no visible binding for global variable
‘mat.analyse.RF’
several_URF : several_URF_temp: no visible binding for global variable
‘nf’
several_URF : several_URF_temp: no visible binding for '<<-' assignment
to ‘URF_nbtree’
several_URF : several_URF_temp: no visible binding for global variable
‘URF_nbtree’
several_URF : several_URF_temp: no visible binding for global variable
‘URF_meth’
several_URF: no visible binding for '<<-' assignment to ‘nff1’
several_URF: no visible binding for global variable ‘nf’
several_URF: no visible binding for global variable ‘nff1’
supRFGUI.RF : prediction: no visible binding for global variable
‘SRF_ini_prediction’
supRFGUI.RF : RF_temp: no visible binding for global variable ‘fact.RF’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘fact.temp’
supRFGUI.RF : RF_temp: no visible binding for global variable ‘nf’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘fact.supRF.init’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF_ini_nbforest’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘nbtree.temp’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF.init.nbtree’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘nbtree.temp’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘mat.analyse.RF’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘mtry.temp’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF.init.mtry’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘mtry.temp’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘fact.temp’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF_ini_dat’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF_ini_OOB’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘SRF_ini_nbforest’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to ‘OOB’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘SRF_ini_dat’
supRFGUI.RF : RF_temp: no visible binding for global variable ‘OOB’
supRFGUI.RF : RF_temp: no visible binding for global variable
‘SRF_ini_OOB’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF.init.prox.raw’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘SRF_ini_prediction’
supRFGUI.RF : RF_temp: no visible binding for '<<-' assignment to
‘best’
supRFGUI.RF : RF_temp: no visible binding for global variable ‘best’
supRFGUI.RF : RF_temp: no visible binding for global variable ‘nb’
supRFGUI.RF: no visible binding for '<<-' assignment to ‘nff’
supRFGUI.RF: no visible binding for global variable ‘nf’
supRFGUI.RF: no visible binding for global variable ‘nff’
supRFGUI.fitted.RF : prediction: no visible binding for global variable
‘SRF_fit_prediction’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘fact.RF’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘fact.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘nf’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘fact.supRF.fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF_ini_nbforest_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘nbtree.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF.fit.nbtree’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘nbtree.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘mat.analyse.RF.fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘mtry.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF.fit.mtry’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘mtry.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘fact.temp’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF_ini_dat_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF_ini_OOB_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘SRF_ini_nbforest_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘OOB’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘SRF_ini_dat_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘OOB’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘SRF_ini_OOB_fitted’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF.fitted.prox.raw’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘SRF_fit_prediction’
supRFGUI.fitted.RF : RF_temp: no visible binding for '<<-' assignment
to ‘best’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘best’
supRFGUI.fitted.RF : RF_temp: no visible binding for global variable
‘nb’
supRFGUI.fitted.RF: no visible binding for '<<-' assignment to ‘nff’
supRFGUI.fitted.RF: no visible binding for global variable ‘nf’
supRFGUI.fitted.RF: no visible binding for global variable ‘nff’
tk_select: no visible binding for global variable ‘fact.RF.init’
tk_select: no visible binding for global variable ‘fact.RF’
tk_select: no visible binding for global variable ‘tb1’
tk_select: no visible binding for global variable ‘mat.analyse.RF’
tk_select: no visible binding for global variable ‘mat.analyse.RF.init’
tk_select: no visible binding for global variable ‘tb2’
tk_select: no visible binding for global variable ‘URF_meth’
tk_select: no visible binding for global variable ‘URF_tune_mtry_incr’
tk_select: no visible binding for global variable
‘URF_tune_mtry_forest’
tk_select: no visible binding for global variable
‘URF_tune_mtry_nbtree’
tk_select: no visible binding for global variable ‘URF_nbforest’
tk_select: no visible binding for global variable ‘URF_nbtree’
tk_select: no visible binding for global variable ‘URF_mtryy’
tk_select: no visible binding for global variable ‘URF_mds.type’
tk_select: no visible binding for global variable ‘URF_mds’
tk_select: no visible binding for global variable ‘URF_mds_nbperm’
tk_select: no visible binding for global variable ‘cluster_algo’
tk_select: no visible binding for global variable ‘nb_clust_URF’
tk_select: no visible binding for global variable ‘tb3’
tk_select: no visible binding for global variable ‘SRF_ini_mtry’
tk_select: no visible binding for global variable
‘SRF_ini_tunemtry_nbforest’
tk_select: no visible binding for global variable
‘SRF_ini_tunemtry_nbtree’
tk_select: no visible binding for global variable ‘fact.supRF.init’
tk_select: no visible binding for global variable ‘SRF.init.mtry’
tk_select: no visible binding for global variable ‘SRF_ini_OOB’
tk_select: no visible binding for global variable ‘SRF_ini_nbforest’
tk_select: no visible binding for global variable ‘SRF.init.nbtree’
tk_select: no visible binding for global variable ‘SRF_init_mds.type’
tk_select: no visible binding for global variable ‘SRF_ini_mds’
tk_select: no visible binding for global variable ‘SRF_init_nbperm’
tk_select: no visible binding for global variable ‘MDA_conditional’
tk_select: no visible binding for global variable
‘decrease_nb_var_nbtree’
tk_select: no visible binding for global variable
‘decrease_nb_var_mtryincr’
tk_select: no visible binding for global variable
‘decrease_nb_var_nbfor_aff’
tk_select: no visible binding for global variable
‘decrease_nb_var_nbtree_aff’
tk_select: no visible binding for global variable
‘SRF_ini_tune_nb_var_aff_maxmin’
tk_select: no visible binding for global variable ‘tb4’
tk_select: no visible binding for global variable
‘SRF_ini_myvarimp_selected’
tk_select: no visible binding for global variable ‘SRF_ini_myvarimp’
tk_select: no visible binding for global variable
‘mat.analyse.RF.fitted’
tk_select: no visible binding for global variable ‘SRF_ini_mtry_fitted’
tk_select: no visible binding for global variable
‘SRF_fit_tunemtry_nbforest’
tk_select: no visible binding for global variable
‘SRF_fin_tunemtry_nbtree’
tk_select: no visible binding for global variable ‘fact.supRF.fitted’
tk_select: no visible binding for global variable ‘SRF.fit.mtry’
tk_select: no visible binding for global variable ‘SRF_ini_OOB_fitted’
tk_select: no visible binding for global variable ‘correlation’
tk_select: no visible binding for global variable
‘SRF_ini_nbforest_fitted’
tk_select: no visible binding for global variable ‘SRF.fit.nbtree’
tk_select: no visible binding for global variable ‘SRF_fitted_mds.type’
tk_select: no visible binding for global variable ‘SRF_fitted_mds’
tk_select: no visible binding for global variable ‘SRF_fitted_nbperm’
tk_select: no visible binding for global variable ‘tb5’
tk_select: no visible binding for global variable ‘ctree_fitted_pval’
tk_select: no visible binding for global variable ‘tb6’
tk_select: no visible binding for global variable ‘colo_fig_par’
tk_select: no visible binding for global variable ‘nb’
unsup.mode.RF: no visible binding for global variable ‘nf’
waitGUI : temp: no visible binding for global variable ‘colo_fig_par’
waitGUI: no visible binding for '<<-' assignment to ‘z’
waitGUI: no visible binding for global variable ‘z’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [3s/3s] OK
- checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
‘/home/hornik/tmp/R.check/r-devel/Work/PKGS/RandForestGUI.Rcheck/00check.log’
for details.