• using R Under development (unstable) (2012-05-19 r59366)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘DirichletReg/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘DirichletReg’ version ‘0.3-0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘DirichletReg’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... NOTE
  The following files are already in R: ‘jss.bst’
  Please remove them from your package.
  The following files should probably not be installed:
  ‘Z.cls’
  
  Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
  or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
• checking examples ... ERROR
  Running examples in ‘DirichletReg-Ex.R’ failed
  The error most likely occurred in:
  
  > ### Name: BloodSamples
  > ### Title: Serum Protein Composition In Blood Samples
  > ### Aliases: BloodSamples
  > ### Keywords: datasets
  >
  > ### ** Examples
  >
  > head(BloodSamples)
  Albumin Pre.Albumin Globulin.A Globulin.B Disease New
  A1 0.348 0.197 0.201 0.254 A No
  A2 0.386 0.239 0.141 0.242 A No
  A3 0.471 0.240 0.089 0.200 A No
  A4 0.427 0.245 0.111 0.217 A No
  A5 0.346 0.230 0.204 0.219 A No
  A6 0.485 0.231 0.101 0.183 A No
  > Bl <- DR_data(BloodSamples[,1:4])
  Warning in DR_data(BloodSamples[, 1:4]) :
  not all rows sum up to 1 => normalization forced
  > plot(Bl)
  Error in rgl.cur() : rgl_dev_getcurrent
  Calls: plot ... plot.DirichletRegData -> plot_DRdata_4d -> view3d -> .check3d -> rgl.cur
  Execution halted