Check results for 'intamap'

using R Under development (unstable) (2013-04-22 r62639)
using platform: x86_64-unknown-linux-gnu (64-bit)
using session charset: UTF-8
checking for file ‘intamap/DESCRIPTION’ ... OK
this is package ‘intamap’ version ‘1.3-28’
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘intamap’ can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking loading without being on the library search path ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking examples ... [16s/16s] OK
checking for unstated dependencies in tests ... OK
checking tests ... [55s/55s] OK
Running ‘anisotropyTest.R’ [13s/13s]
Comparing ‘anisotropyTest.Rout’ to ‘anisotropyTest.Rout.save’ ...242c242
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
244,245c244,246
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
247c248
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
251c252
< 1st Qu.: 20626 1st Qu.:136146 1st Qu.:141.8 1st Qu.:18002
---
> 1st Qu.: 20626 1st Qu.:136147 1st Qu.:141.8 1st Qu.:18002
254c255
< 3rd Qu.: 94458 3rd Qu.:210897 3rd Qu.:155.2 3rd Qu.:20372
---
> 3rd Qu.: 94458 3rd Qu.:210897 3rd Qu.:155.2 3rd Qu.:20373
Running ‘block.R’
Comparing ‘block.Rout’ to ‘block.Rout.save’ ...71c71
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
73,74c73,75
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
76c77
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
99c100
< Mean :0.0143819 Mean :7.713 Mean :0.19837 Mean :4.507
---
> Mean :0.0143819 Mean :7.713 Mean :0.19836 Mean :4.507
101c102
< Max. :0.0411645 Max. :8.326 Max. :0.41361 Max. :4.954
---
> Max. :0.0411645 Max. :8.326 Max. :0.41356 Max. :4.954
Running ‘idw.R’
Comparing ‘idw.Rout’ to ‘idw.Rout.save’ ...32c32
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
34,35c34,36
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
37c38
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
Running ‘interpolate.R’
Comparing ‘interpolate.Rout’ to ‘interpolate.Rout.save’ ...26,27c26,27
< R 2013-04-22 21:48:33 interpolating 155 observations, 100 prediction locations
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> R 2013-04-22 14:54:17 interpolating 155 observations, 100 prediction locations
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
29,30c29,31
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
32c33
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
67c68
< R 2013-04-22 21:48:34 interpolating 155 observations, 100 prediction locations
---
> R 2013-04-22 14:54:17 interpolating 155 observations, 100 prediction locations
130c131
< R 2013-04-22 21:48:35 interpolating 155 observations, 100 prediction locations
---
> R 2013-04-22 14:54:18 interpolating 155 observations, 100 prediction locations
157c158
< R 2013-04-22 21:48:35 interpolating 30 observations, 24 prediction locations
---
> R 2013-04-22 14:54:18 interpolating 30 observations, 24 prediction locations
163c164
< R 2013-04-22 21:48:40 interpolating 30 observations, 24 prediction locations
---
> R 2013-04-22 14:54:22 interpolating 30 observations, 24 prediction locations
188,192c189,193
< 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.7 1st Qu.: 24183
< Median :179932 Median :331806 Median : 536.9 Median : 51920900
< Mean :179932 Mean :331806 Mean : 737.7 Mean : 50269438
< 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1197.0 3rd Qu.:100000000
< Max. :180827 Max. :333298 Max. :1609.1 Max. :100000000
---
> 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.7 1st Qu.: 24184
> Median :179932 Median :331806 Median : 536.9 Median : 51920840
> Mean :179932 Mean :331806 Mean : 737.8 Mean : 50269442
> 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1197.2 3rd Qu.:100000000
> Max. :180827 Max. :333298 Max. :1609.5 Max. :100000000
195,199c196,200
< 1st Qu.:0.0064254 1st Qu.:237.7
< Median :0.0882558 Median :340.5
< Mean :0.1286682 Mean :386.1
< 3rd Qu.:0.2171298 3rd Qu.:481.7
< Max. :0.4152420 Max. :857.0
---
> 1st Qu.:0.0064258 1st Qu.:237.7
> Median :0.0882520 Median :340.5
> Mean :0.1286777 Mean :386.1
> 3rd Qu.:0.2171650 3rd Qu.:481.7
> Max. :0.4152390 Max. :857.0
Running ‘interpolateBlock.R’
Comparing ‘interpolateBlock.Rout’ to ‘interpolateBlock.Rout.save’ ...24c24
< R 2013-04-22 21:48:43 interpolating 155 observations, 48 prediction locations
---
> R 2013-04-22 14:48:45 interpolating 155 observations, 48 prediction locations
28c28
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
30,31c30,32
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
33c34
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
73c74
< R 2013-04-22 21:48:44 interpolating 155 observations, 48 prediction locations
---
> R 2013-04-22 14:48:45 interpolating 155 observations, 48 prediction locations
Running ‘javaR.R’
Comparing ‘javaR.Rout’ to ‘javaR.Rout.save’ ...41c41
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
43,44c43,45
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
46c47
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
Running ‘linearVariogram.R’
Comparing ‘linearVariogram.Rout’ to ‘linearVariogram.Rout.save’ ...40c40
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
42,43c42,44
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
45c46
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
Running ‘minimal.R’
Comparing ‘minimal.Rout’ to ‘minimal.Rout.save’ ...48c48
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
50,51c50,52
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
53c54
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
Running ‘transGaussian.R’
Comparing ‘transGaussian.Rout’ to ‘transGaussian.Rout.save’ ...19c19
< R 2013-04-22 21:48:56 interpolating 155 observations, 3103 prediction locations
---
> R 2013-04-22 14:48:55 interpolating 155 observations, 3103 prediction locations
21c21
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
23,24c23,25
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
26c27
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
38c39
< Median :179980 Median :331220 Median : 283.2 Median : 16730
---
> Median :179980 Median :331220 Median : 283.2 Median : 16731
Running ‘unbiased.R’
Comparing ‘unbiased.Rout’ to ‘unbiased.Rout.save’ ...44c44
< rgdal: version: 0.8-8, (SVN revision Unversioned directory)
---
> rgdal: version: 0.8-6, (SVN revision Unversioned directory)
46,47c46,48
< Loaded GDAL runtime: GDAL 1.9.1, released 2012/05/15
< Path to GDAL shared files: /usr/share/gdal
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-3.0.0/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
49c50
< Path to PROJ.4 shared files: (autodetected)
---
> Path to PROJ.4 shared files: C:/Program Files/R/R-3.0.0/library/rgdal/proj
checking PDF version of manual ... OK