• using R Under development (unstable) (2013-04-22 r62639)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘RecordLinkage/DESCRIPTION’ ... OK
• this is package ‘RecordLinkage’ version ‘0.4-1’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘RecordLinkage’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  countpattern: warning in tabulate(xpat, nb = 2^nvar): partial argument
  match of 'nb' to 'nbins'
  .computeMRL: no visible binding for global variable ‘.N’
  .ffpredict: no visible binding for global variable ‘i1’
  .ffpredict: no visible binding for global variable ‘i2’
  loadRLObject: no visible binding for global variable ‘patterns’
  loadRLObject: no visible binding for global variable ‘Wdata’
  loadRLObject: no visible binding for global variable ‘WdataInd’
  loadRLObject: no visible binding for global variable ‘M’
  loadRLObject: no visible binding for global variable ‘U’
  getErrorMeasures,RLResult: no visible binding for global variable ‘i1’
  getErrorMeasures,RLResult: no visible binding for global variable ‘i2’
  getMinimalTrain,RLBigData: no visible binding for global variable ‘i1’
  getMinimalTrain,RLBigData: no visible binding for global variable ‘i2’
  getMinimalTrain,RecLinkData: no visible binding for global variable
  ‘ID’
  getParetoThreshold,RLBigData: no visible binding for global variable
  ‘i1’
  getParetoThreshold,RLBigData: no visible binding for global variable
  ‘i2’
  getPatternCounts,RLBigData: no visible binding for global variable ‘i1’
  getPatternCounts,RLBigData: no visible binding for global variable ‘i2’
  optimalThreshold,RLBigData: no visible binding for global variable ‘i2’
  optimalThreshold,RLBigData: no visible binding for global variable ‘i1’
  optimalThreshold,RLBigData: no visible binding for global variable
  ‘is_match’
  optimalThreshold,RLBigData: no visible binding for global variable ‘W’
  optimalThreshold,RLBigData: no visible binding for global variable
  ‘nMatch’
  optimalThreshold,RLBigData: no visible binding for global variable
  ‘nAll’
  optimalThreshold,RLBigData: no visible binding for global variable
  ‘nNonMatch’
  optimalThreshold,RecLinkData: no visible binding for global variable
  ‘is_match’
  optimalThreshold,RecLinkData: no visible binding for global variable
  ‘Wdata’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [101s/101s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [54s/55s] OK
• checking re-building of vignette PDFs ... [51s/52s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/data/blackswan/ripley/R/packages/tests-devel/RecordLinkage.Rcheck/00check.log’
  for details.