• using R Under development (unstable) (2013-04-22 r62639)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘RcmdrPlugin.coin/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘RcmdrPlugin.coin’ version ‘1.0-21’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘RcmdrPlugin.coin’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    enterTableMHTest: no visible binding for global variable ‘top’
    enterTableMHTest : onOK: no visible binding for global variable
    ‘percentsVariable’
    enterTableMHTest : onOK: no visible binding for global variable
    ‘testVariable’
    enterTableMHTest : onOK: no visible binding for global variable
    ‘.Table’
    enterTableMHTest: no visible binding for global variable
    ‘percentsFrame’
    enterTableMHTest: no visible binding for global variable ‘testFrame’
    enterTableMHTest: no visible binding for global variable ‘buttonsFrame’
    fncCoinAnsariBradleyTest: no visible binding for global variable ‘top’
    fncCoinAnsariBradleyTest : onOK: no visible binding for global variable
    ‘alternativeVariable’
    fncCoinAnsariBradleyTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinAnsariBradleyTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinAnsariBradleyTest : onOK: no visible binding for global variable
    ‘tiesmethodVariable’
    fncCoinAnsariBradleyTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinAnsariBradleyTest: no visible binding for global variable
    ‘testFrame’
    fncCoinAnsariBradleyTest: no visible binding for global variable
    ‘tiesmethodFrame’
    fncCoinAnsariBradleyTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinAnsariBradleyTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinCochraneMHTest: no visible binding for global variable ‘top’
    fncCoinCochraneMHTest : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncCoinCochraneMHTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinCochraneMHTest : onOK: no visible binding for global variable
    ‘.Table’
    fncCoinCochraneMHTest: no visible binding for global variable
    ‘percentsFrame’
    fncCoinCochraneMHTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinCochraneMHTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinFlignerKilleenTest: no visible binding for global variable ‘top’
    fncCoinFlignerKilleenTest : onOK: no visible binding for global
    variable ‘alternativeVariable’
    fncCoinFlignerKilleenTest : onOK: no visible binding for global
    variable ‘testVariable’
    fncCoinFlignerKilleenTest : onOK: no visible binding for global
    variable ‘subsetVariable’
    fncCoinFlignerKilleenTest : onOK: no visible binding for global
    variable ‘tiesmethodVariable’
    fncCoinFlignerKilleenTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinFlignerKilleenTest: no visible binding for global variable
    ‘testFrame’
    fncCoinFlignerKilleenTest: no visible binding for global variable
    ‘tiesmethodFrame’
    fncCoinFlignerKilleenTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinFlignerKilleenTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinFriedmanTest: no visible binding for global variable ‘top’
    fncCoinFriedmanTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinFriedmanTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinFriedmanTest : onOK: no visible binding for global variable
    ‘objGlobalPValue’
    fncCoinFriedmanTest: no visible binding for global variable ‘testFrame’
    fncCoinFriedmanTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinFriedmanTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinKruskalWallisTest: no visible binding for global variable ‘top’
    fncCoinKruskalWallisTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinKruskalWallisTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinKruskalWallisTest : onOK: no visible binding for global variable
    ‘NDWD’
    fncCoinKruskalWallisTest: no visible binding for global variable
    ‘testFrame’
    fncCoinKruskalWallisTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinKruskalWallisTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinMHTest: no visible binding for global variable ‘top’
    fncCoinMHTest: no visible binding for global variable ‘subsetVariable’
    fncCoinMHTest : onOK: no visible binding for global variable
    ‘.bolEqualNbLevels’
    fncCoinMHTest : onOK: no visible binding for global variable
    ‘.bolEqualLevels’
    fncCoinMHTest : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncCoinMHTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinMHTest : onOK: no visible binding for global variable ‘.Test’
    fncCoinMHTest : onOK: no visible binding for global variable ‘.Table’
    fncCoinMHTest: no visible binding for global variable ‘percentsFrame’
    fncCoinMHTest: no visible binding for global variable ‘testFrame’
    fncCoinMHTest: no visible binding for global variable ‘subsetFrame’
    fncCoinMHTest: no visible binding for global variable ‘buttonsFrame’
    fncCoinMaxstatSurvTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinMaxstatSurvTest: no visible binding for global variable ‘top’
    fncCoinMaxstatSurvTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinMaxstatSurvTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinMaxstatTest: no visible binding for global variable ‘top’
    fncCoinMaxstatTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinMaxstatTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinMaxstatTest: no visible binding for global variable ‘testFrame’
    fncCoinMaxstatTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinMaxstatTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinMedianTest: no visible binding for global variable ‘top’
    fncCoinMedianTest : onOK: no visible binding for global variable
    ‘alternativeVariable’
    fncCoinMedianTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinMedianTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinMedianTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinMedianTest: no visible binding for global variable ‘testFrame’
    fncCoinMedianTest: no visible binding for global variable ‘subsetFrame’
    fncCoinMedianTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinNormalTest: no visible binding for global variable ‘top’
    fncCoinNormalTest : onOK: no visible binding for global variable
    ‘alternativeVariable’
    fncCoinNormalTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinNormalTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinNormalTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinNormalTest: no visible binding for global variable ‘testFrame’
    fncCoinNormalTest: no visible binding for global variable ‘subsetFrame’
    fncCoinNormalTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinPairedWilcoxonTest: no visible binding for global variable ‘top’
    fncCoinPairedWilcoxonTest : onOK: no visible binding for global
    variable ‘zeromethodVariable’
    fncCoinPairedWilcoxonTest : onOK: no visible binding for global
    variable ‘alternativeVariable’
    fncCoinPairedWilcoxonTest : onOK: no visible binding for global
    variable ‘subsetVariable’
    fncCoinPairedWilcoxonTest : onOK: no visible binding for global
    variable ‘testVariable’
    fncCoinPairedWilcoxonTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinPairedWilcoxonTest: no visible binding for global variable
    ‘testFrame’
    fncCoinPairedWilcoxonTest: no visible binding for global variable
    ‘zeromethodFrame’
    fncCoinPairedWilcoxonTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinPairedWilcoxonTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinSpearmanTest: no visible binding for global variable ‘top’
    fncCoinSpearmanTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinSpearmanTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinSpearmanTest: no visible binding for global variable ‘testFrame’
    fncCoinSpearmanTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinSpearmanTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinSurvTest : onOK: no visible binding for global variable
    ‘tiesmethodVariable’
    fncCoinSurvTest : onOK: no visible binding for global variable
    ‘testVariable’
    fncCoinSurvTest : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinSurvTest: no visible binding for global variable ‘top’
    fncCoinSurvTest: no visible binding for global variable
    ‘tiesmethodFrame’
    fncCoinSurvTest: no visible binding for global variable ‘testFrame’
    fncCoinSurvTest: no visible binding for global variable ‘subsetFrame’
    fncCoinSurvTest: no visible binding for global variable ‘buttonsFrame’
    fncCoinTwoSamplePermutationTest: no visible binding for global variable
    ‘top’
    fncCoinTwoSamplePermutationTest : onOK: no visible binding for global
    variable ‘alternativeVariable’
    fncCoinTwoSamplePermutationTest : onOK: no visible binding for global
    variable ‘testVariable’
    fncCoinTwoSamplePermutationTest : onOK: no visible binding for global
    variable ‘subsetVariable’
    fncCoinTwoSamplePermutationTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinTwoSamplePermutationTest: no visible binding for global variable
    ‘testFrame’
    fncCoinTwoSamplePermutationTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinTwoSamplePermutationTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘top’
    fncCoinTwoSampleWilcoxonTest : onOK: no visible binding for global
    variable ‘twoSampleWilcoxonTest’
    fncCoinTwoSampleWilcoxonTest : onOK: no visible binding for global
    variable ‘alternativeVariable’
    fncCoinTwoSampleWilcoxonTest : onOK: no visible binding for global
    variable ‘zeromethodVariable’
    fncCoinTwoSampleWilcoxonTest : onOK: no visible binding for global
    variable ‘testVariable’
    fncCoinTwoSampleWilcoxonTest : onOK: no visible binding for global
    variable ‘subsetVariable’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘alternativeFrame’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘testFrame’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘zeromethodFrame’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘subsetFrame’
    fncCoinTwoSampleWilcoxonTest: no visible binding for global variable
    ‘buttonsFrame’
    fncCoinTwoWayTable: no visible binding for global variable ‘top’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘chisqTestVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘chisqComponentsVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘expFreqVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘adjPvalVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘lblTestVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘fisherTestVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘.Test’
    fncCoinTwoWayTable : onOK: no visible binding for global variable
    ‘.Table’
    fncCoinTwoWayTable: no visible binding for global variable
    ‘percentsFrame’
    fncCoinTwoWayTable: no visible binding for global variable ‘testsFrame’
    fncCoinTwoWayTable: no visible binding for global variable
    ‘subsetFrame’
    fncCoinTwoWayTable: no visible binding for global variable
    ‘buttonsFrame’

    Found the following assignments to the global environment:
    File ‘RcmdrPlugin.coin/R/fncCoinCochraneMHTest.R’:
    assign(".Table", justDoIt(command), envir = .GlobalEnv)
    File ‘RcmdrPlugin.coin/R/fncCoinMHTest.R’:
    assign(".Table", justDoIt(command), envir = .GlobalEnv)
    assign(".bolEqualNbLevels", justDoIt(command), envir = .GlobalEnv)
    assign(".bolEqualLevels", justDoIt(command), envir = .GlobalEnv)
    assign(".Table", justDoIt(command), envir = .GlobalEnv)
    File ‘RcmdrPlugin.coin/R/fncCoinTwoWayTable.R’:
    assign(".Table", justDoIt(command), envir = .GlobalEnv)
    assign(".Test", justDoIt(command), envir = .GlobalEnv)
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... NONE
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/data/blackswan/ripley/R/packages/tests-devel/RcmdrPlugin.coin.Rcheck/00check.log’
    for details.